Here is a list of all class members with links to the classes they belong to:

- d -

• d() : LU
• d_ : LU
• Data : pwiz::frequency::ParametrizedFunction< value_type >::ErrorFunction
• data() : pwiz::data::FrequencyData , pwiz::data::peakdata::Peak , pwiz::chemistry::Formula , pwiz::minimxml::SAXParser::saxstring
• Data : pwiz::frequency::ParameterEstimator
• data : pwiz::msdata::BinaryDataArray , pwiz::msdata::SpectrumInfo
• data_ : pwiz::frequency::ParametrizedFunction< value_type >::ErrorFunction
• data_type : pwiz::math::Stats
• databaseFilters : pwiz::identdata::SpectrumIdentificationProtocol
• databaseName : pwiz::data::pepxml::SearchDatabase , pwiz::identdata::SearchDatabase
• DatabaseQuery() : pwiz::eharmony::DatabaseQuery
• databaseReleaseIdentifier : pwiz::data::pepxml::SearchDatabase
• databaseTranslation : pwiz::identdata::SpectrumIdentificationProtocol
• dataCollection : pwiz::identdata::IdentData
• DataFetcherContainer() : pwiz::eharmony::DataFetcherContainer
• dataFilters : pwiz::data::pepxml::DatasetDerivation
• DataInfo() : pwiz::analysis::MSDataAnalyzer::DataInfo
• DataProcessing : pwiz::msdata::mz5::Configuration_mz5 , pwiz::msdata::DataProcessing
• dataProcessingList_ : pwiz::msdata::mz5::ReferenceWrite_mz5
• dataProcessingMapping_ : pwiz::msdata::mz5::ReferenceWrite_mz5
• DataProcessingMZ5() : pwiz::msdata::mz5::DataProcessingMZ5
• dataProcessingPtr : pwiz::msdata::BinaryDataArray , pwiz::msdata::Spectrum , pwiz::msdata::Chromatogram , pwiz::msdata::ChromatogramListBase , pwiz::msdata::SpectrumList , pwiz::msdata::SpectrumListSimple , pwiz::msdata::ChromatogramList , pwiz::msdata::ChromatogramListSimple , pwiz::msdata::SpectrumListBase , MyBase , pwiz::msdata::SpectrumListWrapper
• dataProcessingPtrs : pwiz::msdata::MSData
• dataProcessingRefID : pwiz::msdata::mz5::ChromatogramMZ5 , pwiz::msdata::mz5::SpectrumMZ5
• datasetDerivation : pwiz::data::pepxml::MSMSPipelineAnalysis
• dataSize : pwiz::msdata::SpectrumInfo
• date : pwiz::data::pepxml::MSMSPipelineAnalysis
• Datum : pwiz::frequency::ParameterEstimator , pwiz::frequency::ParametrizedFunction< value_type >::ErrorFunction
• DBSequence() : pwiz::identdata::DBSequence
• dbsequence_p() : pwiz::identdata::dbsequence_p
• dbSequencePtr : pwiz::identdata::PeptideEvidence , pwiz::identdata::ProteinDetectionHypothesis
• dbSequences : pwiz::identdata::SequenceCollection
• decimalRatio : pwiz::data::pepxml::Q3RatioResult
• decode() : pwiz::msdata::BinaryDataEncoder
• decoyPrefix() : pwiz::analysis::ProteinList_DecoyGenerator::Predicate
• decoyPrefix_ : pwiz::analysis::ProteinList_DecoyGenerator::Predicate
• def : pwiz::cv::CVTermInfo , pwiz::data::Term
• defaultArrayLength : pwiz::msdata::Chromatogram , pwiz::msdata::Spectrum
• defaultArrayLengthSet_ : pwiz::analysis::SpectrumList_FilterPredicate_DefaultArrayLengthSet
• defaultChromatogramDataProcessingRefID : pwiz::msdata::mz5::RunMZ5
• defaultChromatogramDataProcessingRefID_ : pwiz::msdata::mz5::ReferenceRead_mz5
• defaultInstrumentConfigurationPtr : pwiz::msdata::Run
• defaultInstrumentConfigurationRefID : pwiz::msdata::mz5::RunMZ5
• DefaultReaderList() : pwiz::identdata::DefaultReaderList , pwiz::msdata::DefaultReaderList , pwiz::proteome::DefaultReaderList , pwiz::tradata::DefaultReaderList
• defaultSourceFilePtr : pwiz::msdata::Run
• defaultSpectrumDataProcessingRefID : pwiz::msdata::mz5::RunMZ5
• defaultSpectrumDataProcessingRefID_ : pwiz::msdata::mz5::ReferenceRead_mz5
• DefaultTabHandler() : pwiz::utility::DefaultTabHandler
• define() : pwiz::msdata::Component
• deflateLvl_ : pwiz::msdata::mz5::Configuration_mz5
• delegate : pwiz::minimxml::SAXParser::Handler::Status
• Delegate : pwiz::minimxml::SAXParser::Handler::Status
• deletionCost : pwiz::eharmony::EditDistance
• delim : pwiz::analysis::PepxmlRecordReader::Config
• delim_ : pwiz::identdata::DelimWriter
• Delimiter : pwiz::analysis::TabularConfig
• delimiter_ : pwiz::analysis::TabularConfig
• Delimiter_Comma : pwiz::analysis::TabularConfig
• Delimiter_FixedWidth : pwiz::analysis::TabularConfig
• Delimiter_Space : pwiz::analysis::TabularConfig
• Delimiter_Tab : pwiz::analysis::TabularConfig
• DelimReader() : pwiz::identdata::DelimReader
• DelimWriter() : pwiz::identdata::DelimWriter
• delta : pwiz::analysis::PepxmlRecordReader::record
• deltaAvgMass : TestModification
• deltacn : pwiz::analysis::PepxmlRecordReader::record
• deltacnstar : pwiz::analysis::PepxmlRecordReader::record
• deltaMonoMass : TestModification
• deltaMZ : pwiz::msdata::mz5::FileInformationMZ5Data
• dEndTime : RunHeaderStruct
• dependant : pwiz::identdata::CVMap
• depth_ : pwiz::identdata::TextWriter , pwiz::msdata::TextWriter , pwiz::proteome::TextWriter , pwiz::tradata::TextWriter
• dereference() : pwiz::peptideid::PeptideID::IteratorInternal , pwiz::peptideid::PeptideID::Iterator
• describe() : pwiz::analysis::MS2NoiseFilter , pwiz::analysis::SpectrumDataFilter , pwiz::analysis::ChromatogramDataFilter , pwiz::analysis::MS2Deisotoper , pwiz::analysis::PrecursorMassFilter , pwiz::analysis::ThresholdFilter
• description() : pwiz::analysis::analyzer_strings< RegionTIC > , pwiz::analysis::analyzer_strings< analyzer_type > , pwiz::data::pepxml::SampleEnzyme , pwiz::data::pepxml::AminoAcidModification , pwiz::data::pepxml::DataFilter , pwiz::proteome::Protein , pwiz::analysis::analyzer_strings< MetadataReporter > , pwiz::analysis::analyzer_strings< Pseudo2DGel > , pwiz::analysis::analyzer_strings< RegionSIC > , pwiz::analysis::analyzer_strings< RegionSlice > , pwiz::analysis::analyzer_strings< RunSummary > , pwiz::analysis::analyzer_strings< SpectrumBinaryData > , pwiz::analysis::analyzer_strings< SpectrumTable >
• detailLevel_ : HasBinaryDataPredicate
• detect() : pwiz::analysis::LocalMaximumPeakDetector , pwiz::analysis::PeakDetector , pwiz::analysis::FeatureDetector , pwiz::analysis::FeatureDetectorPeakel , pwiz::analysis::FeatureDetectorSimple , pwiz::analysis::PeakFamilyDetector , pwiz::analysis::PeakFamilyDetectorFT
• detectionRadius() : pwiz::frequency::PeakDetectorNaive
• detector : InstrumentStruct , pwiz::msdata::LegacyAdapter_Instrument , pwiz::msdata::ComponentList , pwiz::msdata::LegacyAdapter_Instrument
• detectors : pwiz::msdata::mz5::ComponentsMZ5
• didFiltering : pwiz::msdata::mz5::FileInformationMZ5Data
• Diff() : pwiz::data::Diff< object_type, config_type, object_result_type >
• DiffConfig() : pwiz::msdata::DiffConfig , pwiz::identdata::DiffConfig , pwiz::proteome::DiffConfig , pwiz::tradata::DiffConfig
• difference_type : pwiz::util::CharIndexedVectorConstIterator< T > , pwiz::util::virtual_map< keyT, valueT, _Pr, _Alloc > , pwiz::proteome::Digestion::const_iterator , pwiz::msdata::SpectrumIterator , pwiz::util::CharIndexedVectorIterator< T > , pwiz::util::IntegerSet::Iterator , pwiz::util::shared_map< keyT, valueT, _Pr, _Alloc >
• differenceQuotient() : pwiz::frequency::DerivativeTest::VectorFunction< value_type >
• DigestedPeptide() : pwiz::proteome::DigestedPeptide
• Digestion() : pwiz::proteome::Digestion , pwiz::proteome::Digestion::const_iterator , pwiz::proteome::Digestion
• Digestion::Impl : pwiz::proteome::Digestion::const_iterator
• directory() : pwiz::msaux::Path
• disambiguateCleavageAgentRegex() : pwiz::proteome::Digestion
• DistanceAttribute() : pwiz::eharmony::DistanceAttribute
• distribution() : pwiz::calibration::MassSpread , pwiz::chemistry::IsotopeCalculator , pwiz::calibration::MassSpread , pwiz::chemistry::IsotopeTable
• distribution_point : pwiz::data::pepxml::PeptideProphetSummary
• domain : pwiz::math::MatchedFilter::SampledData< space_type >
• domain_type : pwiz::math::MatchedFilter::SampledData< space_type >
• domainWidth() : pwiz::math::MatchedFilter::SampledData< space_type >
• done : Reader1::Config , pwiz::analysis::ProteinList_FilterPredicate_IdSet , Reader2::Config , pwiz::analysis::ProteinList_FilterPredicate_IndexSet , Reader1::ReaderConfig , SelectedIndexPredicate , pwiz::analysis::SpectrumList_FilterPredicate_IndexSet , pwiz::analysis::SpectrumList_FilterPredicate_ScanNumberSet , SelectedIndexPredicate , pwiz::analysis::ProteinList_Filter::Predicate , pwiz::analysis::SpectrumList_Filter::Predicate
• Done : pwiz::minimxml::SAXParser::Handler::Status
• done : Reader2::ReaderConfig
• doShuffel() : pwiz::msdata::mz5::Configuration_mz5
• dot : pwiz::math::MatchedFilter::Correlation< Y >
• dot_product : pwiz::analysis::PepxmlRecordReader::record
• doTranslating() : pwiz::msdata::mz5::Configuration_mz5
• doTranslating_ : pwiz::msdata::mz5::Configuration_mz5
• dp : pwiz::msdata::ChromatogramListSimple , pwiz::msdata::SpectrumListSimple , ParametrizedCosine , pwiz::frequency::TruncatedLorentzian , pwiz::frequency::ParametrizedFunction< value_type >::ErrorFunction , pwiz::frequency::ParametrizedFunction< value_type >
• dp2() : ParametrizedCosine , pwiz::frequency::ParametrizedFunction< value_type > , pwiz::frequency::ParametrizedFunction< value_type >::ErrorFunction , pwiz::frequency::TruncatedLorentzian
• dp_ : pwiz::msdata::SpectrumListWrapper , pwiz::msdata::ChromatogramListBase , pwiz::msdata::SpectrumListBase
• dStartTime : RunHeaderStruct
• dummy : pwiz::math::MatchedFilter::KernelTraits< Kernel >
• dumpRegionData : pwiz::analysis::RegionAnalyzer::Config
• dx() : pwiz::math::MatchedFilter::SampledData< space_type >