pwiz::data::pepxml::MSMSPipelineAnalysis Struct Reference

#include <MinimumPepXML.hpp>

List of all members.

Public Member Functions
	MSMSPipelineAnalysis ()
void	write (XMLWriter &writer) const
void	read (std::istream &is)
bool	operator== (const MSMSPipelineAnalysis &that) const
bool	operator!= (const MSMSPipelineAnalysis &that) const

Public Attributes
std::string	date
std::string	summaryXML
std::string	xmlns
std::string	xmlnsXSI
std::string	XSISchemaLocation
std::string	baseName
	full path file name of mzXML (minus the .mzXML)
std::string	raw_data_type
	raw data type extension (e.g. .mzXML)
std::string	raw_data
	raw data type extension (e.g. .mzXML)
std::string	msManufacturer
	Manufacturer of MS/MS instrument.
std::string	msModel
	Instrument model (cf mzXML)
std::string	msIonization
	Instrument model (cf mzXML)
std::string	msMassAnalyzer
	Ion trap, etc (cf mzXML)
std::string	msDetector
	EMT, etc(cf mzXML)
AnalysisSummaryPtr	analysisSummary
DatasetDerivationPtr	datasetDerivation
MSMSRunSummary	msmsRunSummary

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Detailed Description

Definition at line 598 of file MinimumPepXML.hpp.

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Constructor & Destructor Documentation

pwiz::data::pepxml::MSMSPipelineAnalysis::MSMSPipelineAnalysis ( )

inline

Definition at line 600 of file MinimumPepXML.hpp.

{}

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Member Function Documentation

void pwiz::data::pepxml::MSMSPipelineAnalysis::write

(

XMLWriter &

writer

)

const

Referenced by testInvarianceUnderProteinProphet(), and testMSMSPipelineAnalysis().

void pwiz::data::pepxml::MSMSPipelineAnalysis::read

(

std::istream &

is

)

Referenced by test(), testInvarianceUnderProteinProphet(), and testMSMSPipelineAnalysis().

bool pwiz::data::pepxml::MSMSPipelineAnalysis::operator==

(

const MSMSPipelineAnalysis &

that

)

const

bool pwiz::data::pepxml::MSMSPipelineAnalysis::operator!=

(

const MSMSPipelineAnalysis &

that

)

const

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Member Data Documentation

std::string pwiz::data::pepxml::MSMSPipelineAnalysis::date

Definition at line 602 of file MinimumPepXML.hpp.

Referenced by testMSMSPipelineAnalysis().

std::string pwiz::data::pepxml::MSMSPipelineAnalysis::summaryXML

Definition at line 603 of file MinimumPepXML.hpp.

Referenced by testMSMSPipelineAnalysis().

std::string pwiz::data::pepxml::MSMSPipelineAnalysis::xmlns

Definition at line 604 of file MinimumPepXML.hpp.

Referenced by testMSMSPipelineAnalysis().

std::string pwiz::data::pepxml::MSMSPipelineAnalysis::xmlnsXSI

Definition at line 605 of file MinimumPepXML.hpp.

Referenced by testMSMSPipelineAnalysis().

std::string pwiz::data::pepxml::MSMSPipelineAnalysis::XSISchemaLocation

Definition at line 606 of file MinimumPepXML.hpp.

Referenced by testMSMSPipelineAnalysis().

std::string pwiz::data::pepxml::MSMSPipelineAnalysis::baseName

full path file name of mzXML (minus the .mzXML)

Definition at line 609 of file MinimumPepXML.hpp.

std::string pwiz::data::pepxml::MSMSPipelineAnalysis::raw_data_type

raw data type extension (e.g. .mzXML)

Definition at line 612 of file MinimumPepXML.hpp.

std::string pwiz::data::pepxml::MSMSPipelineAnalysis::raw_data

raw data type extension (e.g. .mzXML)

Definition at line 615 of file MinimumPepXML.hpp.

std::string pwiz::data::pepxml::MSMSPipelineAnalysis::msManufacturer

Manufacturer of MS/MS instrument.

Definition at line 618 of file MinimumPepXML.hpp.

std::string pwiz::data::pepxml::MSMSPipelineAnalysis::msModel

Instrument model (cf mzXML)

Definition at line 621 of file MinimumPepXML.hpp.

std::string pwiz::data::pepxml::MSMSPipelineAnalysis::msIonization

Instrument model (cf mzXML)

Definition at line 624 of file MinimumPepXML.hpp.

std::string pwiz::data::pepxml::MSMSPipelineAnalysis::msMassAnalyzer

Ion trap, etc (cf mzXML)

Definition at line 627 of file MinimumPepXML.hpp.

std::string pwiz::data::pepxml::MSMSPipelineAnalysis::msDetector

EMT, etc(cf mzXML)

Definition at line 630 of file MinimumPepXML.hpp.

AnalysisSummaryPtr pwiz::data::pepxml::MSMSPipelineAnalysis::analysisSummary

Definition at line 632 of file MinimumPepXML.hpp.

DatasetDerivationPtr pwiz::data::pepxml::MSMSPipelineAnalysis::datasetDerivation

Definition at line 633 of file MinimumPepXML.hpp.

MSMSRunSummary pwiz::data::pepxml::MSMSPipelineAnalysis::msmsRunSummary

Definition at line 634 of file MinimumPepXML.hpp.

Referenced by testMerge(), and testMSMSPipelineAnalysis().

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The documentation for this struct was generated from the following file:

• /Users/parag/_Research/pwiz/svn/trunk/pwiz/pwiz/data/misc/MinimumPepXML.hpp