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• a() : pwiz::proteome::Fragmentation
• accept() : pwiz::analysis::ChromatogramList_SavitzkyGolaySmoother , pwiz::analysis::ProteinList_Filter::Predicate , pwiz::analysis::SpectrumList_ChargeStateCalculator , pwiz::analysis::SpectrumList_FilterPredicate_ScanTimeRange , SelectedIndexPredicate , HasBinaryDataPredicate , pwiz::analysis::SpectrumList_FilterPredicate_MSLevelSet , HasBinaryDataPredicate , pwiz::analysis::SpectrumList_MetadataFixer , pwiz::analysis::SpectrumList_Filter::Predicate , pwiz::analysis::SpectrumList_FilterPredicate_MSLevelSet , pwiz::analysis::SpectrumList_PeakFilter , pwiz::analysis::SpectrumList_PeakPicker , pwiz::analysis::SpectrumList_FilterPredicate_PrecursorMzSet , pwiz::analysis::SpectrumList_Smoother , pwiz::analysis::SpectrumList_TitleMaker , pwiz::analysis::ProteinList_FilterPredicate_IndexSet , pwiz::analysis::SpectrumList_Filter::Predicate , pwiz::analysis::SpectrumList_FilterPredicate_PrecursorMzSet , pwiz::analysis::SpectrumList_ZeroSamplesFilter , pwiz::identdata::Reader , pwiz::analysis::SpectrumList_FilterPredicate_DefaultArrayLengthSet , pwiz::msdata::Reader , pwiz::msdata::SpectrumIterator::Sieve , pwiz::analysis::SpectrumList_FilterPredicate_IndexSet , pwiz::analysis::SpectrumList_FilterPredicate_DefaultArrayLengthSet , FTSieve , pwiz::proteome::Reader , pwiz::analysis::SpectrumList_FilterPredicate_ActivationType , pwiz::tradata::Reader , pwiz::analysis::ChromatogramListWrapper , pwiz::analysis::ProteinList_FilterPredicate_IdSet , pwiz::analysis::SpectrumList_FilterPredicate_ScanNumberSet , pwiz::analysis::SpectrumList_FilterPredicate_ActivationType , pwiz::analysis::SpectrumList_FilterPredicate_AnalyzerType , pwiz::analysis::SpectrumList_FilterPredicate_ScanEventSet , pwiz::analysis::SpectrumList_FilterPredicate_AnalyzerType , pwiz::analysis::SpectrumList_FilterPredicate_Polarity , SelectedIndexPredicate , pwiz::analysis::SpectrumList_FilterPredicate_ScanEventSet , pwiz::analysis::SpectrumList_FilterPredicate_Polarity , EvenPredicate , pwiz::analysis::SpectrumList_FilterPredicate_ScanTimeRange , EvenMS2Predicate
• access() : pwiz::eharmony::Matrix , pwiz::minimxml::SAXParser::Handler::Attributes
• AdaptedErrorDerivative() : pwiz::frequency::DerivativeTest::AdaptedErrorDerivative< value_type >
• AdaptedErrorFunction() : pwiz::frequency::DerivativeTest::AdaptedErrorFunction< value_type >
• add() : pwiz::minimxml::XMLWriter::Attributes
• addDistanceAttribute() : pwiz::eharmony::NeighborJoiner
• addInformation() : pwiz::msdata::mz5::RunMZ5
• addListener() : pwiz::util::IterationListenerRegistry
• addListenerWithTimer() : pwiz::util::IterationListenerRegistry
• addParamMap() : pwiz::identdata::Pep2MzIdent
• addSpectrumIndexPair() : pwiz::msdata::mz5::ReferenceRead_mz5 , pwiz::msdata::mz5::ReferenceWrite_mz5
• addToBuffer() : pwiz::msdata::mz5::Connection_mz5
• adjustRT() : pwiz::eharmony::DataFetcherContainer
• allDataProcessingPtrs() : pwiz::msdata::MSData
• alpha() : pwiz::frequency::MagnitudeLorentzian
• AlternativeProtein() : pwiz::data::pepxml::AlternativeProtein
• AmbiguousResidue() : pwiz::identdata::AmbiguousResidue
• AminoAcidModification() : pwiz::data::pepxml::AminoAcidModification
• AMTDatabase() : pwiz::eharmony::AMTDatabase
• AnalysisResult() : pwiz::data::pepxml::AnalysisResult
• AnalysisSoftware() : pwiz::identdata::AnalysisSoftware
• analyze() : pwiz::data::FrequencyData , pwiz::analysis::MSDataAnalyzerDriver
• analyzer() : pwiz::msdata::LegacyAdapter_Instrument , pwiz::msdata::ComponentList
• anchors() : pwiz::eharmony::DataFetcherContainer
• angle() : pwiz::math::MatchedFilter::Correlation< Y >
• append() : pwiz::proteome::PeptideDatabase
• argsFormat() : pwiz::analysis::analyzer_strings< RegionTIC > , pwiz::analysis::analyzer_strings< RunSummary > , pwiz::analysis::analyzer_strings< MetadataReporter > , pwiz::analysis::analyzer_strings< analyzer_type > , pwiz::analysis::analyzer_strings< Pseudo2DGel > , pwiz::analysis::analyzer_strings< RegionSlice > , pwiz::analysis::analyzer_strings< SpectrumBinaryData > , pwiz::analysis::analyzer_strings< SpectrumTable > , pwiz::analysis::analyzer_strings< RegionSIC >
• argsUsage() : pwiz::analysis::analyzer_strings< Pseudo2DGel > , pwiz::analysis::analyzer_strings< MetadataReporter > , pwiz::analysis::analyzer_strings< RegionTIC > , pwiz::analysis::analyzer_strings< SpectrumTable > , pwiz::analysis::analyzer_strings< RegionSlice > , pwiz::analysis::analyzer_strings< analyzer_type > , pwiz::analysis::analyzer_strings< RunSummary > , pwiz::analysis::analyzer_strings< SpectrumBinaryData > , pwiz::analysis::analyzer_strings< RegionSIC >
• argumentCount() : pwiz::frequency::DerivativeTest::VectorFunction< value_type > , pwiz::frequency::DerivativeTest::AdaptedErrorFunction< value_type > , pwiz::frequency::DerivativeTest::AdaptedErrorDerivative< value_type > , pwiz::frequency::DerivativeTest::ParametrizedDerivativeSlice< value_type > , pwiz::frequency::DerivativeTest::ParametrizedFunctionSlice< value_type >
• assign() : auto_vector< T >
• assign_direct() : auto_vector< T >
• attribute() : pwiz::minimxml::SAXParser::Handler::Attributes::attribute
• Attributes() : pwiz::minimxml::SAXParser::Handler::Attributes
• auto_lvalue() : auto_vector< T >::auto_lvalue
• auto_vector() : auto_vector< T >
• averageDeltaMass() : pwiz::proteome::ModificationMap , pwiz::proteome::Modification , pwiz::proteome::ModificationList