- p -

• Pair() : pwiz::calibration::MassSpread::Pair
• Parabola() : pwiz::math::Parabola
• Parameter() : pwiz::data::peakdata::Software::Parameter , pwiz::data::pepxml::Parameter , pwiz::data::peakdata::Software::Parameter
• parameterCount() : pwiz::frequency::ParametrizedFunction< value_type > , pwiz::frequency::ParametrizedFunction< value_type >::ErrorFunction , ParametrizedCosine , pwiz::frequency::TruncatedLorentzian
• parameters() : pwiz::frequency::TruncatedLorentzianParameters , pwiz::calibration::Calibrator , pwiz::calibration::LeastSquaresCalibrator , pwiz::frequency::TruncatedLorentzianParameters
• ParametrizedDerivativeSlice() : pwiz::frequency::DerivativeTest::ParametrizedDerivativeSlice< value_type >
• ParametrizedFunctionSlice() : pwiz::frequency::DerivativeTest::ParametrizedFunctionSlice< value_type >
• ParamGroup() : pwiz::data::ParamGroup
• ParamGroupMZ5() : pwiz::msdata::mz5::ParamGroupMZ5
• ParamListMZ5() : pwiz::msdata::mz5::ParamListMZ5
• ParamListsMZ5() : pwiz::msdata::mz5::ParamListsMZ5
• parse() : pwiz::util::IntegerSet
• parseAttributes() : pwiz::minimxml::SAXParser::Handler::Attributes
• Peak() : pwiz::data::peakdata::Peak
• Peakel() : pwiz::data::peakdata::Peakel
• PeakelGrower_Proximity() : pwiz::analysis::PeakelGrower_Proximity
• PeakelPicker_Basic() : pwiz::analysis::PeakelPicker_Basic
• PeakExtractor() : pwiz::analysis::PeakExtractor
• PeakFamily() : pwiz::data::peakdata::PeakFamily
• PeakFamilyDetectorFT() : pwiz::analysis::PeakFamilyDetectorFT
• PeakFinder_SNR() : pwiz::analysis::PeakFinder_SNR
• PeakFitter_Parabola() : pwiz::analysis::PeakFitter_Parabola
• Pep2MzIdent() : pwiz::identdata::Pep2MzIdent
• Peptide() : pwiz::identdata::Peptide , pwiz::proteome::Peptide , pwiz::tradata::Peptide
• PeptideDatabaseFormula() : pwiz::proteome::PeptideDatabaseFormula
• PeptideDatabaseRecord() : pwiz::proteome::PeptideDatabaseRecord
• PeptideEntry() : pwiz::eharmony::PeptideEntry
• PeptideEvidence() : pwiz::identdata::PeptideEvidence
• PeptideID_dataFetcher() : pwiz::eharmony::PeptideID_dataFetcher
• PeptideID_flat() : pwiz::peptideid::PeptideID_flat
• PeptideID_pepXml() : pwiz::peptideid::PeptideID_pepXml
• PeptideMatcher() : pwiz::eharmony::PeptideMatcher
• PeptideProphetResult() : pwiz::data::pepxml::PeptideProphetResult
• PepxmlRecordReader() : pwiz::analysis::PepxmlRecordReader
• Person() : pwiz::identdata::Person
• pick() : pwiz::analysis::PeakelPicker , pwiz::analysis::PeakelPicker_Basic
• PiecewiseLinearWarpFunction() : pwiz::eharmony::PiecewiseLinearWarpFunction
• pixel() : pwiz::util::Image
• Point() : pwiz::util::Image::Point
• PointsToSame() : PointsToSame
• pop_back() : auto_vector< T >
• popStyle() : pwiz::minimxml::XMLWriter
• position() : pwiz::minimxml::XMLWriter
• positionNext() : pwiz::minimxml::XMLWriter
• Precursor() : pwiz::msdata::Precursor
• PrecursorInfo() : pwiz::analysis::SpectrumList_PrecursorRefine::PrecursorInfo , pwiz::analysis::PrecursorRecalculator::PrecursorInfo , pwiz::msdata::SpectrumInfo::PrecursorInfo
• PrecursorListMZ5() : pwiz::msdata::mz5::PrecursorListMZ5
• PrecursorMassFilter() : pwiz::analysis::PrecursorMassFilter
• PrecursorMZ5() : pwiz::msdata::mz5::PrecursorMZ5
• PrecursorRecalculatorDefault() : pwiz::analysis::PrecursorRecalculatorDefault
• prefix() : pwiz::cv::CVTermInfo
• preprocess() : ParametrizedCosine
• print_headers() : pwiz::analysis::PepxmlRecordReader
• PrintAttribute() : PrintAttribute
• printDifferenceQuotientSequence() : pwiz::frequency::DerivativeTest::VectorFunction< value_type >
• PrintEventHandler() : PrintEventHandler
• process() : pwiz::analysis::Pseudo2DGel::Config , pwiz::utility::TabReader
• processFiles() : pwiz::eharmony::Matcher
• processingInstruction() : pwiz::minimxml::SAXParser::Handler , PrintEventHandler , pwiz::minimxml::XMLWriter
• ProcessingMethod() : pwiz::msdata::ProcessingMethod
• ProcessingMethodListMZ5() : pwiz::msdata::mz5::ProcessingMethodListMZ5
• ProcessingMethodMZ5() : pwiz::msdata::mz5::ProcessingMethodMZ5
• progress() : pwiz::analysis::MSDataAnalyzerDriver::ProgressCallback , SimpleProgressCallback , CancelProgressCallback
• prompt() : pwiz::util::ClickwrapPrompter
• Protein() : pwiz::proteome::Protein
• protein() : pwiz::proteome::ProteinListSimple , pwiz::proteome::ProteinListWrapper , FilterWrapper , pwiz::analysis::ProteinList_Filter , pwiz::proteome::ProteinList
• Protein() : pwiz::tradata::Protein
• protein() : pwiz::analysis::ProteinList_DecoyGenerator , pwiz::proteome::ProteinListCache
• ProteinAmbiguityGroup() : pwiz::identdata::ProteinAmbiguityGroup
• ProteinDetection() : pwiz::identdata::ProteinDetection
• ProteinDetectionHypothesis() : pwiz::identdata::ProteinDetectionHypothesis
• ProteinDetectionList() : pwiz::identdata::ProteinDetectionList
• ProteinDetectionProtocol() : pwiz::identdata::ProteinDetectionProtocol
• ProteinList_DecoyGenerator() : pwiz::analysis::ProteinList_DecoyGenerator
• ProteinList_DecoyGeneratorPredicate_Reversed() : pwiz::analysis::ProteinList_DecoyGeneratorPredicate_Reversed
• ProteinList_DecoyGeneratorPredicate_Shuffled() : pwiz::analysis::ProteinList_DecoyGeneratorPredicate_Shuffled
• ProteinList_Filter() : pwiz::analysis::ProteinList_Filter
• ProteinList_FilterPredicate_IdSet() : pwiz::analysis::ProteinList_FilterPredicate_IdSet
• ProteinList_FilterPredicate_IndexSet() : pwiz::analysis::ProteinList_FilterPredicate_IndexSet
• ProteinListCache() : pwiz::proteome::ProteinListCache
• ProteinListWrapper() : pwiz::proteome::ProteinListWrapper
• ProteomeData() : pwiz::proteome::ProteomeData
• ProteomeDataFile() : pwiz::proteome::ProteomeDataFile
• Provider() : pwiz::identdata::Provider
• Pseudo2DGel() : pwiz::analysis::Pseudo2DGel
• push_back() : auto_vector< T >
• pushStyle() : pwiz::minimxml::XMLWriter
• putFeatureRetentionTimes() : pwiz::eharmony::DataFetcherContainer
• putPeptideRetentionTimes() : pwiz::eharmony::DataFetcherContainer
• pvalue() : pwiz::analysis::Noise
• pwiz_RAMPAdapter() : pwiz_RAMPAdapter