ProteomeData object plus file I/O. More...

Inheritance diagram for pwiz::proteome::ProteomeDataFile:

Classes
struct	WriteConfig
	configuration for write() More...

Public Member Functions
	ProteomeDataFile (const std::string &uri, bool indexed=false)
	constructs ProteomeData object backed by file; indexed==true -> uses DefaultReaderList with indexing
	ProteomeDataFile (const std::string &uri, const Reader &reader)
	constructs ProteomeData object backed by file using the specified reader
void	write (const std::string &uri, const WriteConfig &config=WriteConfig(), const pwiz::util::IterationListenerRegistry *iterationListenerRegistry=0)
	member write function
Public Member Functions inherited from pwiz::proteome::ProteomeData
	ProteomeData ()
virtual	~ProteomeData ()
bool	empty () const

Static Public Member Functions
static void	write (const ProteomeData &pd, const std::string &uri, const WriteConfig &config=WriteConfig(), const pwiz::util::IterationListenerRegistry *iterationListenerRegistry=0)
	static write function for any ProteomeData object; iterationListenerRegistry may be used for progress updates

Additional Inherited Members
Public Attributes inherited from pwiz::proteome::ProteomeData
std::string	id
ProteinListPtr	proteinListPtr

Detailed Description

ProteomeData object plus file I/O.

Definition at line 39 of file ProteomeDataFile.hpp.

Constructor & Destructor Documentation

pwiz::proteome::ProteomeDataFile::ProteomeDataFile	(	const std::string &	uri,
		bool	indexed = `false`
	)

constructs ProteomeData object backed by file; indexed==true -> uses DefaultReaderList with indexing

pwiz::proteome::ProteomeDataFile::ProteomeDataFile	(	const std::string &	uri,
		const Reader &	reader
	)

constructs ProteomeData object backed by file using the specified reader

static void pwiz::proteome::ProteomeDataFile::write	(	const ProteomeData &	pd,
		const std::string &	uri,
		const WriteConfig &	config = `WriteConfig()`,
		const pwiz::util::IterationListenerRegistry *	iterationListenerRegistry = `0`
	)

static

static write function for any ProteomeData object; iterationListenerRegistry may be used for progress updates

void pwiz::proteome::ProteomeDataFile::write	(	const std::string &	uri,
		const WriteConfig &	config = `WriteConfig()`,
		const pwiz::util::IterationListenerRegistry *	iterationListenerRegistry = `0`
	)

member write function

The documentation for this struct was generated from the following file:

/Users/parag/_Research/pwiz/svn/trunk/pwiz/pwiz/data/proteome/ProteomeDataFile.hpp