#include <TraData.hpp>

Inheritance diagram for pwiz::tradata::Protein:

Public Member Functions
	Protein (const std::string &id="")
bool	empty () const
	returns true iff all members are empty and contain no params
Public Member Functions inherited from pwiz::data::ParamContainer
CVParam	cvParam (CVID cvid) const
	finds cvid in the container:
CVParam	cvParamChild (CVID cvid) const
	finds child of cvid in the container:
std::vector< CVParam >	cvParamChildren (CVID cvid) const
	finds all children of cvid in the container:
bool	hasCVParam (CVID cvid) const
	returns true iff cvParams contains exact cvid (recursive)
bool	hasCVParamChild (CVID cvid) const
	returns true iff cvParams contains a child (is_a) of cvid (recursive)
UserParam	userParam (const std::string &) const
	finds UserParam with specified name
void	set (CVID cvid, const std::string &value="", CVID units=CVID_Unknown)
	set/add a CVParam (not recursive)
void	set (CVID cvid, double value, CVID units=CVID_Unknown)
	set/add a CVParam (not recursive)
void	set (CVID cvid, int value, CVID units=CVID_Unknown)
	set/add a CVParam (not recursive)
template<typename value_type >
void	set (CVID cvid, value_type value, CVID units=CVID_Unknown)
	set/add a CVParam (not recursive)
void	clear ()
	clears the collections
bool	operator== (const ParamContainer &that) const
	returns true iff this and that have the exact same cvParams and userParams
bool	operator!= (const ParamContainer &that) const
	returns !(this==that)
template<>
void	set (CVID cvid, bool value, CVID units)
	special case for bool (outside the class for gcc 3.4, and inline for msvc)

Public Attributes
std::string	id
	Identifier for the protein to be used for referencing within a document.
std::string	sequence
	Amino acid sequence of the protein.
Public Attributes inherited from pwiz::data::ParamContainer
std::vector< ParamGroupPtr >	paramGroupPtrs
	a collection of references to ParamGroups
std::vector< CVParam >	cvParams
	a collection of controlled vocabulary terms
std::vector< UserParam >	userParams
	a collection of uncontrolled user terms

Detailed Description

Definition at line 170 of file TraData.hpp.

Constructor & Destructor Documentation

pwiz::tradata::Protein::Protein ( const std::string & id = "" )

bool pwiz::tradata::Protein::empty ( ) const

returns true iff all members are empty and contain no params

std::string pwiz::tradata::Protein::id

Identifier for the protein to be used for referencing within a document.

Definition at line 173 of file TraData.hpp.

std::string pwiz::tradata::Protein::sequence

Amino acid sequence of the protein.

Definition at line 176 of file TraData.hpp.

The documentation for this struct was generated from the following file: