pwiz::msdata::SpectrumInfo Struct Reference

simple structure for holding Spectrum info More...

#include <SpectrumInfo.hpp>

List of all members.

Classes
struct	PrecursorInfo
	structure for Precursor info More...

Public Member Functions
	SpectrumInfo ()
	SpectrumInfo (const Spectrum &spectrum)
void	update (const Spectrum &spectrum, bool getBinaryData=false)
void	clearBinaryData ()
std::string	massAnalyzerTypeAbbreviation () const
double	mzFromFilterString () const

Public Attributes
size_t	index
std::string	id
int	scanNumber
CVID	massAnalyzerType
int	scanEvent
int	msLevel
bool	isZoomScan
double	retentionTime
std::string	filterString
double	mzLow
double	mzHigh
double	basePeakMZ
double	basePeakIntensity
double	totalIonCurrent
double	thermoMonoisotopicMZ
double	ionInjectionTime
std::vector< PrecursorInfo >	precursors
size_t	dataSize
std::vector< MZIntensityPair >	data

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Detailed Description

simple structure for holding Spectrum info

Definition at line 37 of file SpectrumInfo.hpp.

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Constructor & Destructor Documentation

pwiz::msdata::SpectrumInfo::SpectrumInfo

(

)

pwiz::msdata::SpectrumInfo::SpectrumInfo

(

const Spectrum &

spectrum

)

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Member Function Documentation

void pwiz::msdata::SpectrumInfo::update	(	const Spectrum &	spectrum,
		bool	getBinaryData = false
	)

Referenced by test().

void pwiz::msdata::SpectrumInfo::clearBinaryData

(

)

Referenced by test().

std::string pwiz::msdata::SpectrumInfo::massAnalyzerTypeAbbreviation

(

)

const

double pwiz::msdata::SpectrumInfo::mzFromFilterString

(

)

const

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Member Data Documentation

size_t pwiz::msdata::SpectrumInfo::index

Definition at line 50 of file SpectrumInfo.hpp.

Referenced by checkSpectrumInfo(), test(), testAutomaticUpdate(), and testUpdateRequest().

std::string pwiz::msdata::SpectrumInfo::id

Definition at line 51 of file SpectrumInfo.hpp.

Referenced by test(), testAutomaticUpdate(), and testUpdateRequest().

int pwiz::msdata::SpectrumInfo::scanNumber

Definition at line 52 of file SpectrumInfo.hpp.

Referenced by checkSpectrumInfo(), and test().

CVID pwiz::msdata::SpectrumInfo::massAnalyzerType

Definition at line 53 of file SpectrumInfo.hpp.

Referenced by test().

int pwiz::msdata::SpectrumInfo::scanEvent

Definition at line 54 of file SpectrumInfo.hpp.

int pwiz::msdata::SpectrumInfo::msLevel

Definition at line 55 of file SpectrumInfo.hpp.

Referenced by checkSpectrumInfo(), and test().

bool pwiz::msdata::SpectrumInfo::isZoomScan

Definition at line 56 of file SpectrumInfo.hpp.

double pwiz::msdata::SpectrumInfo::retentionTime

Definition at line 57 of file SpectrumInfo.hpp.

Referenced by extractPeaks(), and test().

std::string pwiz::msdata::SpectrumInfo::filterString

Definition at line 58 of file SpectrumInfo.hpp.

double pwiz::msdata::SpectrumInfo::mzLow

Definition at line 59 of file SpectrumInfo.hpp.

Referenced by test().

double pwiz::msdata::SpectrumInfo::mzHigh

Definition at line 60 of file SpectrumInfo.hpp.

Referenced by test().

double pwiz::msdata::SpectrumInfo::basePeakMZ

Definition at line 61 of file SpectrumInfo.hpp.

double pwiz::msdata::SpectrumInfo::basePeakIntensity

Definition at line 62 of file SpectrumInfo.hpp.

double pwiz::msdata::SpectrumInfo::totalIonCurrent

Definition at line 63 of file SpectrumInfo.hpp.

double pwiz::msdata::SpectrumInfo::thermoMonoisotopicMZ

Definition at line 64 of file SpectrumInfo.hpp.

double pwiz::msdata::SpectrumInfo::ionInjectionTime

Definition at line 65 of file SpectrumInfo.hpp.

std::vector<PrecursorInfo> pwiz::msdata::SpectrumInfo::precursors

Definition at line 66 of file SpectrumInfo.hpp.

Referenced by checkSpectrumInfo(), and test().

size_t pwiz::msdata::SpectrumInfo::dataSize

Definition at line 67 of file SpectrumInfo.hpp.

std::vector<MZIntensityPair> pwiz::msdata::SpectrumInfo::data

Definition at line 68 of file SpectrumInfo.hpp.

Referenced by checkSpectrumInfo(), extractPeaks(), test(), and testAutomaticUpdate().

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The documentation for this struct was generated from the following file:

• /Users/parag/_Research/pwiz/svn/trunk/pwiz/pwiz/data/msdata/SpectrumInfo.hpp