Implementation of the MzIdentMLType from the mzIdentML schema. More...
#include <IdentData.hpp>
Public Member Functions | |
| IdentData (const std::string &id_="", const std::string &creationDate_="") | |
| bool | empty () const |
| const std::string & | version () const |
| returns the version of this mzIdentML document; for a document created programmatically, the version is the current release version of mzIdentML; for a document created from a file/stream, the version is the schema version read from the file/stream | |
 Public Member Functions inherited from pwiz::identdata::Identifiable | |
| Identifiable (const std::string &id_="", const std::string &name_="") | |
| virtual | ~Identifiable () |
Public Attributes | |
| std::string | creationDate |
| std::vector< CV > | cvs |
| std::vector< AnalysisSoftwarePtr > | analysisSoftwareList |
| Provider | provider |
| std::vector< ContactPtr > | auditCollection |
| AnalysisSampleCollection | analysisSampleCollection |
| SequenceCollection | sequenceCollection |
| AnalysisCollection | analysisCollection |
| AnalysisProtocolCollection | analysisProtocolCollection |
| DataCollection | dataCollection |
| std::vector < BibliographicReferencePtr > | bibliographicReference |
| Public Attributes inherited from pwiz::identdata::Identifiable | |
| std::string | id |
| std::string | name |
Protected Attributes | |
| std::string | version_ |
Friends | |
| struct | IO::HandlerIdentData |
Detailed Description
Implementation of the MzIdentMLType from the mzIdentML schema.
The upper-most hierarchy level of mzIdentML with sub-containers for example describing software, protocols and search results (spectrum identifications or protein detection results).
Definition at line 993 of file IdentData.hpp.
Constructor & Destructor Documentation
| pwiz::identdata::IdentData::IdentData | ( | const std::string & | id_ = "", |
| const std::string & | creationDate_ = "" |
||
| ) |
Member Function Documentation
|
virtual |
Reimplemented from pwiz::identdata::Identifiable.
| const std::string& pwiz::identdata::IdentData::version | ( | ) | const |
returns the version of this mzIdentML document; for a document created programmatically, the version is the current release version of mzIdentML; for a document created from a file/stream, the version is the schema version read from the file/stream
Referenced by pwiz::identdata::TextWriter::operator()().
Friends And Related Function Documentation
|
friend |
Definition at line 1033 of file IdentData.hpp.
Member Data Documentation
| std::string pwiz::identdata::IdentData::creationDate |
Definition at line 999 of file IdentData.hpp.
| std::vector<CV> pwiz::identdata::IdentData::cvs |
Definition at line 1004 of file IdentData.hpp.
Referenced by pwiz::identdata::TextWriter::operator()(), and testIdentData().
| std::vector<AnalysisSoftwarePtr> pwiz::identdata::IdentData::analysisSoftwareList |
Definition at line 1006 of file IdentData.hpp.
Referenced by pwiz::identdata::TextWriter::operator()(), stripUnmappedMetadata(), testContactRole(), and testIdentData().
| Provider pwiz::identdata::IdentData::provider |
Definition at line 1008 of file IdentData.hpp.
Referenced by pwiz::identdata::TextWriter::operator()(), stripUnmappedMetadata(), and testContactRole().
| std::vector<ContactPtr> pwiz::identdata::IdentData::auditCollection |
Definition at line 1010 of file IdentData.hpp.
Referenced by createMzid(), pwiz::identdata::TextWriter::operator()(), stripUnmappedMetadata(), testContactRole(), testContacts(), and testIdentData().
| AnalysisSampleCollection pwiz::identdata::IdentData::analysisSampleCollection |
Definition at line 1012 of file IdentData.hpp.
Referenced by pwiz::identdata::TextWriter::operator()(), stripUnmappedMetadata(), testAnalysisSampleCollection(), and testContactRole().
| SequenceCollection pwiz::identdata::IdentData::sequenceCollection |
Definition at line 1014 of file IdentData.hpp.
Referenced by pwiz::identdata::TextWriter::operator()(), stripUnmappedMetadata(), testConversion(), testDBSequence(), testIdentData(), testSerialize(), and testSnapModifications().
| AnalysisCollection pwiz::identdata::IdentData::analysisCollection |
Definition at line 1016 of file IdentData.hpp.
Referenced by pwiz::identdata::TextWriter::operator()(), stripUnmappedMetadata(), testIdentData(), testSerialize(), and testSnapModifications().
| AnalysisProtocolCollection pwiz::identdata::IdentData::analysisProtocolCollection |
Definition at line 1018 of file IdentData.hpp.
Referenced by pwiz::identdata::TextWriter::operator()(), stripUnmappedMetadata(), testSerialize(), and testSnapModifications().
| DataCollection pwiz::identdata::IdentData::dataCollection |
Definition at line 1020 of file IdentData.hpp.
Referenced by pwiz::identdata::TextWriter::operator()(), stripUnmappedMetadata(), testDBSequence(), testIdentData(), testMeasure(), and testSerialize().
| std::vector<BibliographicReferencePtr> pwiz::identdata::IdentData::bibliographicReference |
Definition at line 1022 of file IdentData.hpp.
Referenced by pwiz::identdata::TextWriter::operator()(), stripUnmappedMetadata(), and testIdentData().
|
protected |
Definition at line 1032 of file IdentData.hpp.
The documentation for this struct was generated from the following file:
- /Users/parag/_Research/pwiz/svn/trunk/pwiz/pwiz/data/identdata/IdentData.hpp
