pwiz::identdata::SequenceCollection Struct Reference

Implementation of SequenceCollectionType from the mzIdentML schema. More...

#include <IdentData.hpp>

List of all members.

Public Member Functions
bool	empty () const

Public Attributes
std::vector< DBSequencePtr >	dbSequences
std::vector< PeptidePtr >	peptides
std::vector< PeptideEvidencePtr >	peptideEvidence

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Detailed Description

Implementation of SequenceCollectionType from the mzIdentML schema.

The collection of sequences (DBSequence or Peptide) identified and their relationship between each other (PeptideEvidence) to be referenced elsewhere in the results.

Definition at line 652 of file IdentData.hpp.

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Member Function Documentation

bool pwiz::identdata::SequenceCollection::empty

(

)

const

Referenced by pwiz::identdata::TextWriter::operator()().

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Member Data Documentation

std::vector<DBSequencePtr> pwiz::identdata::SequenceCollection::dbSequences

Definition at line 654 of file IdentData.hpp.

Referenced by pwiz::identdata::TextWriter::operator()(), stripUnmappedMetadata(), testDBSequence(), testIdentData(), testSequenceCollection(), and testSerialize().

std::vector<PeptidePtr> pwiz::identdata::SequenceCollection::peptides

Definition at line 655 of file IdentData.hpp.

Referenced by pwiz::identdata::TextWriter::operator()(), stripUnmappedMetadata(), testConversion(), testIdentData(), testSequenceCollection(), testSerialize(), and testSnapModifications().

std::vector<PeptideEvidencePtr> pwiz::identdata::SequenceCollection::peptideEvidence

Definition at line 656 of file IdentData.hpp.

Referenced by pwiz::identdata::TextWriter::operator()(), testIdentData(), testSequenceCollection(), and testSerialize().

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The documentation for this struct was generated from the following file:

• /Users/parag/_Research/pwiz/svn/trunk/pwiz/pwiz/data/identdata/IdentData.hpp