- m -

• main() : CalibratorTrialTest.cpp , LeastSquaresCalibratorTest.cpp , MassSpreadTest.cpp , ExtraZeroSamplesFilterTest.cpp , DataFetcherContainerTest.cpp , PeakDetectorMatchedFilterTest.cpp , SpectrumList_PrecursorRefineTest.cpp , ProteomeDataTest.cpp , ReaderTest.cpp , SpectrumList_SorterTest.cpp , Serializer_FASTA_Test.cpp , DiffTest.cpp , PeakDetectorNaiveTest.cpp , SpectrumListFactoryTest.cpp , IOTest.cpp , ReaderTest.cpp , BinaryIndexStreamTest.cpp , ReferencesTest.cpp , Serializer_traML_Test.cpp , DistanceAttributesTest.cpp , TruncatedLorentzianParametersTest.cpp , cvtest.cpp , TraDataFileTest.cpp , TraDataTest.cpp , CVTranslatorTest.cpp , Reader_ABI_Test.cpp , Reader_ABI_T2D_Test.cpp , TruncatedLorentzianTest.cpp , diff_std_test.cpp , Reader_Agilent_Test.cpp , Reader_Bruker_Test.cpp , MemoryIndexTest.cpp , Reader_Thermo_Test.cpp , Reader_Waters_Test.cpp , LocalMaximumPeakDetectorTest.cpp , Feature2PeptideMatcherTest.cpp , MSDataAnalyzerTest.cpp , obotest.cpp , ChemistryTest.cpp , IPIFASTADatabaseTest.cpp , TabReaderTest.cpp , SHA1CalculatorTest.cpp , SHA1_ostream_test.cpp , mru_list_test.cpp , IterationListenerTest.cpp , IntegerSetTest.cpp , FilesystemTest.cpp , FailTest.cpp , ExceptionTest.cpp , endian_test.cpp , DateTimeTest.cpp , COMInitializerTest.cpp , ClickwrapPrompterTest.cpp , Base64Test.cpp , automation_vector_test.cpp , almost_equal_test.cpp , XMLWriterTest.cpp , SAXParserTest.cpp , StatsTest.cpp , qrTest.cpp , ParabolaTest.cpp , OrderedPairTest.cpp , MatchedFilterTest.cpp , LinearSolverTest.cpp , LinearLeastSquaresTest.cpp , HouseholderQRTest.cpp , erfTest.cpp , MZToleranceTest.cpp , IsotopeCalculatorTest.cpp , ParamTypesTest.cpp , IsotopeEnvelopeEstimatorTest.cpp , IsotopeTableTest.cpp , MSDataCacheTest.cpp , UnimodTest.cpp , DiffTest.cpp , Feature_dataFetcherTest.cpp , RegionAnalyzerTest.cpp , ExtendedReadTest.cpp , IdentDataTest.cpp , FeatureDetectorPeakelTest.cpp , IOTest.cpp , KwCVMapTest.cpp , PeptideDatabaseTest.cpp , SavitzkyGolaySmootherTest.cpp , MatcherTest.cpp , FeatureDetectorSimpleTest.cpp , Pep2MzIdentTest.cpp , ReaderTest.cpp , ProteomeDataFileTest.cpp , ProteinListWrapperTest.cpp , ProteinListCacheTest.cpp , PeptideTest.cpp , DigestionTest.cpp , DiffTest.cpp , AminoAcidTest.cpp , SpectrumListWrapperTest.cpp , SpectrumListCacheTest.cpp , SpectrumListBaseTest.cpp , SpectrumList_mzXML_Test.cpp , SpectrumList_mzML_Test.cpp , SpectrumList_mz5_Test.cpp , SpectrumList_MSn_Test.cpp , SpectrumList_MGF_Test.cpp , SpectrumIteratorTest.cpp , SpectrumInfoTest.cpp , Serializer_mzXML_Test.cpp , Serializer_mzML_Test.cpp , Serializer_mz5_Test.cpp , Serializer_MSn_Test.cpp , Serializer_MGF_Test.cpp , ReferencesTest.cpp , ReaderTest.cpp , RAMPAdapterTest.cpp , MSnReaderTest.cpp , MSDataTest.cpp , MSDataMergerTest.cpp , MSDataFileTest.cpp , LegacyAdapterTest.cpp , IOTest.cpp , DiffTest.cpp , ChromatogramListBaseTest.cpp , ChromatogramList_mzML_Test.cpp , ChromatogramList_mz5_Test.cpp , BinaryDataEncoderTest.cpp , SampleDatumTest.cpp , PeakDataTest.cpp , MinimumPepXMLTest.cpp , FrequencyDataTest.cpp , CalibrationParametersTest.cpp , Serializer_Text_Test.cpp , Serializer_protXML_Test.cpp , Serializer_pepXML_Test.cpp , FeatureDetectorTuningTest.cpp , ReferencesTest.cpp , Serializer_mzid_Test.cpp , MatrixTest.cpp , FeatureModelerTest.cpp , MZRTFieldTest.cpp , WhittakerSmootherTest.cpp , MSIAMTDataTest.cpp , NoiseTest.cpp , PeakelGrowerTest.cpp , NeighborJoinerTest.cpp , PeakelPickerTest.cpp , PeakExtractorTest.cpp , MassDatabaseTest.cpp , ChromatogramListWrapperTest.cpp , ZeroSampleFillerTest.cpp , PeptideID_dataFetcherTest.cpp , PeakFamilyDetectorFTTest.cpp , PeakFinderTest.cpp , PeptideMatcherTest.cpp , SpectrumList_PrecursorRecalculatorTest.cpp , SpectrumList_PeakFilterTest.cpp , SpectrumList_MZWindowTest.cpp , SpectrumList_MetadataFixerTest.cpp , SpectrumList_FilterTest.cpp , SpectrumList_ChargeStateCalculatorTest.cpp , PrecursorRecalculatorDefaultTest.cpp , ProteinListFactoryTest.cpp , ProteinList_FilterTest.cpp , ProteinList_DecoyGeneratorTest.cpp , PeptideIDMapTest.cpp , PeptideID_pepXMLTest.cpp , PeakFitterTest.cpp , PeptideID_flatTest.cpp , AMTDatabaseTest.cpp , SearchNeighborhoodCalculatorTest.cpp , WarpFunctionTest.cpp , SavitzkyGolaySmootherTest.cpp , BinTest.cpp , FrequencyEstimatorPhysicalModelTest.cpp , FrequencyEstimatorSimpleTest.cpp , DatabaseQueryTest.cpp , MagnitudeLorentzianTest.cpp , ParametrizedFunctionTest.cpp
• makeAlternativeProtein() : MinimumPepXMLTest.cpp
• makeAminoAcidModification() : MinimumPepXMLTest.cpp
• makeAMTContainer() : AMTDatabaseTest.cpp
• makeAnalysisResult() : MinimumPepXMLTest.cpp
• makeEnzymaticSearchConstraint() : MinimumPepXMLTest.cpp
• makeFeature() : PeptideMatcherTest.cpp , Feature_dataFetcherTest.cpp , Feature2PeptideMatcherTest.cpp
• makeFeatureSequenced() : Feature_dataFetcherTest.cpp
• makeMatch() : MinimumPepXMLTest.cpp
• makeModAminoAcidMass() : MinimumPepXMLTest.cpp
• makeModificationInfo() : MinimumPepXMLTest.cpp
• makeMSMSRunSummary() : MinimumPepXMLTest.cpp
• makePeptideID_dataFetcher() : PeptideMatcherTest.cpp , PeptideID_dataFetcherTest.cpp
• makePeptideProphetResult() : MinimumPepXMLTest.cpp
• makeQ3RatioResult() : MinimumPepXMLTest.cpp
• makeSampleEnzyme() : MinimumPepXMLTest.cpp
• makeSearchDatabase() : MinimumPepXMLTest.cpp
• makeSearchHit() : MinimumPepXMLTest.cpp
• makeSearchResult() : MinimumPepXMLTest.cpp
• makeSearchSummary() : MinimumPepXMLTest.cpp
• makeSpecificity() : MinimumPepXMLTest.cpp
• makeSpectrumPtr() : SpectrumListCacheTest.cpp
• makeSpectrumQuery() : NeighborJoinerTest.cpp , PeptideID_dataFetcherTest.cpp , MinimumPepXMLTest.cpp , AMTDatabaseTest.cpp , Feature2PeptideMatcherTest.cpp , PeptideMatcherTest.cpp
• matrix_fracture() : matops.h
• max() : matops.h
• mean_and_sigma() : matops.h
• mean_angle() : matops.h
• min() : matops.h
• modificationTest() : PeptideTest.cpp