#include "ZeroSampleFiller.hpp"
#include "pwiz/utility/misc/unit.hpp"
#include "pwiz/utility/misc/Exception.hpp"
#include "pwiz/utility/misc/Std.hpp"

Classes
struct	TestData

Functions
vector< double >	parseDoubleArray (const string &doubleArray)
void	test ()
int	main (int argc, char *argv[])

Variables
ostream *	os_ = 0
const TestData	testData []
const size_t	testDataSize = sizeof(testData) / sizeof(TestData)
const char *	fullSpectrumRawX = "1480.99726361894 1481.01055598187 1481.0238485834 1481.03714142355 1481.05043450231 1481.06372781971 1481.07702137574 1481.34294261915 1481.35624118796 1481.36953999554 1481.38283904191 1481.39613832706 1481.409437851 1481.42273761375 1481.4360376153 1481.44933785567 1481.46263833486 1481.47593905287 1481.48924000971 1481.50254120539 1481.51584263992 1481.5291443133 1481.54244622554 1481.55574837664 1481.56905076662 1481.58235339547 1481.5956562632 1481.60895936983 1481.62226271535 1481.63556629978 1481.64887012311 1481.66217418536 1481.67547848654 1482.36763154258 1482.38094851586 1482.39426572841 1482.40758318025 1482.42090087136 1482.43421880177 1482.44753697147 1482.46085538047 1482.47417402879 1482.48749291642 1482.50081204337 1482.51413140965 1482.52745101526 1482.54077086022 1493.62532276273 1493.63884277381 1493.65236302966 1493.66588353027 1493.67940427566 1493.69292526583 1493.70644650079 1493.71996798055 1493.73348970511 1493.74701167448 1493.76053388867 1493.77405634768 1511.59045068974 1511.60429789207 1511.6181453481 1511.63199305785 1511.64584102131 1511.65968923849 1511.6735377094 1511.68738643405 1511.70123541244 1511.71508464459 1511.72893413049 1599.95476419777 1599.97027768381 1599.98579147069 1600.00130555844"
const char *	fullSpectrumRawY = "348.306823730469 288.753173828125 157.469802856445 0 0 50.9171905517578 233.195449829102 366.537780761719 333.827880859375 112.628784179688 0 0 0 0 0 0 0 0 146.29948425293 221.006973266602 185.588424682617 0 0 0 0 0 0 0 0 169.829788208008 298.886840820313 375.022705078125 349.165283203125 326.073608398438 321.16162109375 301.307739257813 280.400939941406 268.34130859375 250.299697875977 206.922592163086 161.804183959961 0 0 0 0 0 0 0 0 106.515991210938 216.509872436523 174.441055297852 0 47.4068908691406 197.185470581055 263.215942382813 352.870300292969 434.091491699219 407.799926757813 297.367797851563 209.839736938477 246.22785949707 378.100463867188 491.783874511719 505.840270996094 403.557006835938 229.298934936523 54.6394348144531 0 0 0 0 0 0 0 0 50.5400085449219 198.851058959961 280.1474609375 285.830627441406 210.564895629883 50.8290405273438 0 0 0 0 0 170.184860229492 335.466613769531 475.362731933594 547.797119140625 496.642517089844 292.609191894531 4.42018127441406 0 0 0 0 0 0 0 0 386.298461914063 549.150512695313 612.910278320313 599.075317382813 479.97314453125 260.072143554688 0 0 0 0 0 0 0 0 157.101547241211 216.543563842773 210.621841430664 151.346878051758 0 0 0 0 0 0 0 0 163.830764770508 225.50910949707 155.86100769043 0 0 0 0 0 0 0 0"

Function Documentation

vector<double> parseDoubleArray ( const string & doubleArray )

Definition at line 161 of file ZeroSampleFillerTest.cpp.

{
    vector<double> doubleVector;
    vector<string> tokens;
    bal::split(tokens, doubleArray, bal::is_space(), bal::token_compress_on);
    if (!tokens.empty() && !tokens[0].empty())
        for (size_t i=0; i < tokens.size(); ++i)
            doubleVector.push_back(lexical_cast<double>(tokens[i]));
    return doubleVector;
}

void test ( )

Definition at line 173 of file ZeroSampleFillerTest.cpp.

References e(), fullSpectrumRawX, fullSpectrumRawY, parseDoubleArray(), testData, testDataSize, unit_assert, unit_assert_equal, TestData::xFilled, TestData::xRaw, TestData::yFilled, TestData::yRaw, and TestData::zeroSampleCount.

{
    for (size_t i=0; i < testDataSize; ++i)
    {
        try
        {
            const TestData& data = testData[i];
            
            vector<double> xRaw = parseDoubleArray(data.xRaw);
            vector<double> yRaw = parseDoubleArray(data.yRaw);
            vector<double> targetFilledX = parseDoubleArray(data.xFilled);
            vector<double> targetFilledY = parseDoubleArray(data.yFilled);
            // sanity checks
            unit_assert(xRaw.size() == yRaw.size());
            unit_assert(targetFilledX.size() == targetFilledY.size());
            vector<double> xFilled, yFilled;
            ZeroSampleFiller::fill(xRaw, yRaw, xFilled, yFilled, data.zeroSampleCount);
            unit_assert(xFilled.size() == targetFilledX.size());
            unit_assert(xFilled.size() == yFilled.size());
            for (size_t j=0; j < xFilled.size(); ++j)
            {
                unit_assert_equal(xFilled[j], targetFilledX[j], 1e-5);
                unit_assert_equal(yFilled[j], targetFilledY[j], 1e-5);
            }
        }
        catch (exception& e)
        {
            throw runtime_error("ZeroSampleFiller test case " + lexical_cast<string>(i+1) + " failed: " + e.what());
        }
    }
    vector<double> xRaw = parseDoubleArray(fullSpectrumRawX);
    vector<double> yRaw = parseDoubleArray(fullSpectrumRawY);
    // sanity check
    unit_assert(xRaw.size() == yRaw.size());
    for (size_t zeroSampleCount=1; zeroSampleCount < 100; ++zeroSampleCount)
    {
        try
        {
            vector<double> xFilled, yFilled;
            ZeroSampleFiller::fill(xRaw, yRaw, xFilled, yFilled, zeroSampleCount);
        }
        catch (exception& e)
        {
            throw runtime_error("ZeroSampleFiller full spectrum test case failed at zeroSampleCount=" +
                lexical_cast<string>(zeroSampleCount) + ": " + e.what());
        }
    }
}

int main	(	int	argc,
		char *	argv[]
	)

Definition at line 230 of file ZeroSampleFillerTest.cpp.

References e(), os_, test(), TEST_EPILOG, TEST_FAILED, and TEST_PROLOG.

{
    TEST_PROLOG(argc, argv)
    try
    {
        if (argc>1 && !strcmp(argv[1],"-v")) os_ = &cout;
        test();
    }
    catch (exception& e)
    {
        TEST_FAILED(e.what())
    }
    catch (...)
    {
        TEST_FAILED("Caught unknown exception.")
    }
    TEST_EPILOG
}

Variable Documentation

ostream* os_ = 0

Definition at line 33 of file ZeroSampleFillerTest.cpp.

const TestData testData[]

Definition at line 45 of file ZeroSampleFillerTest.cpp.

const size_t testDataSize = sizeof(testData) / sizeof(TestData)

Definition at line 113 of file ZeroSampleFillerTest.cpp.

const char* fullSpectrumRawX = "1480.99726361894 1481.01055598187 1481.0238485834 1481.03714142355 1481.05043450231 1481.06372781971 1481.07702137574 1481.34294261915 1481.35624118796 1481.36953999554 1481.38283904191 1481.39613832706 1481.409437851 1481.42273761375 1481.4360376153 1481.44933785567 1481.46263833486 1481.47593905287 1481.48924000971 1481.50254120539 1481.51584263992 1481.5291443133 1481.54244622554 1481.55574837664 1481.56905076662 1481.58235339547 1481.5956562632 1481.60895936983 1481.62226271535 1481.63556629978 1481.64887012311 1481.66217418536 1481.67547848654 1482.36763154258 1482.38094851586 1482.39426572841 1482.40758318025 1482.42090087136 1482.43421880177 1482.44753697147 1482.46085538047 1482.47417402879 1482.48749291642 1482.50081204337 1482.51413140965 1482.52745101526 1482.54077086022 1493.62532276273 1493.63884277381 1493.65236302966 1493.66588353027 1493.67940427566 1493.69292526583 1493.70644650079 1493.71996798055 1493.73348970511 1493.74701167448 1493.76053388867 1493.77405634768 1511.59045068974 1511.60429789207 1511.6181453481 1511.63199305785 1511.64584102131 1511.65968923849 1511.6735377094 1511.68738643405 1511.70123541244 1511.71508464459 1511.72893413049 1599.95476419777 1599.97027768381 1599.98579147069 1600.00130555844"

Definition at line 117 of file ZeroSampleFillerTest.cpp.

const char* fullSpectrumRawY = "348.306823730469 288.753173828125 157.469802856445 0 0 50.9171905517578 233.195449829102 366.537780761719 333.827880859375 112.628784179688 0 0 0 0 0 0 0 0 146.29948425293 221.006973266602 185.588424682617 0 0 0 0 0 0 0 0 169.829788208008 298.886840820313 375.022705078125 349.165283203125 326.073608398438 321.16162109375 301.307739257813 280.400939941406 268.34130859375 250.299697875977 206.922592163086 161.804183959961 0 0 0 0 0 0 0 0 106.515991210938 216.509872436523 174.441055297852 0 47.4068908691406 197.185470581055 263.215942382813 352.870300292969 434.091491699219 407.799926757813 297.367797851563 209.839736938477 246.22785949707 378.100463867188 491.783874511719 505.840270996094 403.557006835938 229.298934936523 54.6394348144531 0 0 0 0 0 0 0 0 50.5400085449219 198.851058959961 280.1474609375 285.830627441406 210.564895629883 50.8290405273438 0 0 0 0 0 170.184860229492 335.466613769531 475.362731933594 547.797119140625 496.642517089844 292.609191894531 4.42018127441406 0 0 0 0 0 0 0 0 386.298461914063 549.150512695313 612.910278320313 599.075317382813 479.97314453125 260.072143554688 0 0 0 0 0 0 0 0 157.101547241211 216.543563842773 210.621841430664 151.346878051758 0 0 0 0 0 0 0 0 163.830764770508 225.50910949707 155.86100769043 0 0 0 0 0 0 0 0"

Definition at line 145 of file ZeroSampleFillerTest.cpp.

Classes

Functions

Variables

Function Documentation

Variable Documentation