PeakFamilyDetectorFTTest.cpp File Reference

#include "PeakFamilyDetectorFT.hpp"
#include "pwiz/utility/misc/unit.hpp"
#include "pwiz/utility/misc/Std.hpp"

Go to the source code of this file.

Functions
void	test ()
int	main (int argc, char *argv[])

Variables
ostream *	os_ = 0
double	peakFamilyDetectorFTTestData_ []
int	peakFamilyDetectorFTTestDataSize_

---

Function Documentation

void test

(

)

Definition at line 43 of file PeakFamilyDetectorFTTest.cpp.

References pwiz::analysis::PeakFamilyDetectorFT::Config::cp, pwiz::analysis::PeakFamilyDetectorFT::detect(), pwiz::analysis::PeakFamilyDetectorFT::Config::log, os_, peakFamilyDetectorFTTestData_, peakFamilyDetectorFTTestDataSize_, unit_assert, and unit_assert_equal.

{
    // instantiate PeakFamilyDetectorFT

    PeakFamilyDetectorFT::Config config;
    config.log = os_;
    config.cp = CalibrationParameters::thermo_FT();
    PeakFamilyDetectorFT detector(config); 

    // detect 

    vector<PeakFamily> result;
    const MZIntensityPair* begin = 
        reinterpret_cast<const MZIntensityPair*>(&peakFamilyDetectorFTTestData_[0]);
    const MZIntensityPair* end = begin + peakFamilyDetectorFTTestDataSize_/2;

    detector.detect(begin, end, result);

    if (os_)
    {
        *os_ << setprecision(10) << "result: " << result.size() << endl;
        copy(result.begin(), result.end(), ostream_iterator<PeakFamily>(*os_, "\n"));
    }

    unit_assert(result.size() == 1);
    unit_assert_equal(result[0].mzMonoisotopic, 810.4148, .005);
}

int main	(	int	argc,
		char *	argv[]
	)

Definition at line 72 of file PeakFamilyDetectorFTTest.cpp.

References e(), os_, test(), TEST_EPILOG, TEST_FAILED, and TEST_PROLOG.

{
    TEST_PROLOG(argc, argv)

    try
    {
        if (argc>1 && !strcmp(argv[1],"-v")) os_ = &cout;
        if (os_) *os_ << "PeakFamilyDetectorFTTest\n";
        test();
    }
    catch (exception& e)
    {
        TEST_FAILED(e.what())
    }
    catch (...)
    {
        TEST_FAILED("Caught unknown exception.")
    }

    TEST_EPILOG
}

---

Variable Documentation

ostream* os_ = 0

Definition at line 36 of file PeakFamilyDetectorFTTest.cpp.

double peakFamilyDetectorFTTestData_[]

Referenced by test().

int peakFamilyDetectorFTTestDataSize_

Referenced by test().