IOTest.cpp File Reference

#include "IO.hpp"
#include "Diff.hpp"
#include "examples.hpp"
#include "pwiz/utility/misc/unit.hpp"
#include "pwiz/utility/misc/Std.hpp"

Go to the source code of this file.

Functions
template<typename object_type >
void	testObject (const object_type &a)
void	testCV ()
void	testUserParam ()
void	testCVParam ()
template<typename object_type >
void	testNamedParamContainer ()
void	testSoftware ()
void	testTraData ()
void	test ()
int	main (int argc, char *argv[])

Variables
ostream *	os_ = 0

---

Function Documentation

template<typename object_type >

void testObject

(

const object_type &

a

)

Definition at line 40 of file IOTest.cpp.

References diff(), os_, pwiz::identdata::IO::read(), unit_assert, and write().

{
    if (os_) *os_ << "testObject(): " << typeid(a).name() << endl;

    // write 'a' out to a stream

    ostringstream oss;
    XMLWriter writer(oss);
    IO::write(writer, a);
    if (os_) *os_ << oss.str() << endl;

    // read 'b' in from stream

    object_type b; 
    istringstream iss(oss.str());
    IO::read(iss, b);

    // compare 'a' and 'b'

    Diff<object_type> diff(a,b);
    if (diff && os_) *os_ << "diff:\n" << diff << endl;
    unit_assert(!diff);

    
}

void testCV

(

)

Definition at line 67 of file IOTest.cpp.

References pwiz::cv::CV::fullName, pwiz::cv::CV::id, testObject(), pwiz::cv::CV::URI, and pwiz::cv::CV::version.

{
    CV a;
    a.URI = "abcd";
    a.id = "efgh";
    a.fullName = "ijkl";
    a.version = "mnop";

    testObject(a);
}

void testUserParam

(

)

Definition at line 79 of file IOTest.cpp.

References pwiz::data::UserParam::name, testObject(), pwiz::data::UserParam::type, pwiz::data::UserParam::units, UO_minute, and pwiz::data::UserParam::value.

{
    UserParam a;
    a.name = "abcd";
    a.value = "efgh";
    a.type = "ijkl";
    a.units = UO_minute;

    testObject(a);
}

void testCVParam

(

)

Definition at line 91 of file IOTest.cpp.

References MS_m_z, MS_selected_ion_m_z, testObject(), and UO_second.

{
    CVParam a(MS_selected_ion_m_z, "810.48", MS_m_z);
    testObject(a);

    CVParam b(UO_second, "123.45");
    testObject(b);
}

template<typename object_type >

void testNamedParamContainer

(

)

Definition at line 102 of file IOTest.cpp.

References MS_ionization_type, MS_m_z, MS_selected_ion_m_z, and testObject().

{
    object_type a;
    a.userParams.push_back(UserParam("goober", "goo", "peanuts"));
    a.cvParams.push_back(CVParam(MS_ionization_type, "420"));
    a.cvParams.push_back(CVParam(MS_selected_ion_m_z, "666", MS_m_z));
    testObject(a);
}

void testSoftware

(

)

Definition at line 112 of file IOTest.cpp.

References pwiz::tradata::Software::id, MS_ionization_type, pwiz::data::ParamContainer::set(), testObject(), and pwiz::tradata::Software::version.

{
    Software a;
    a.id = "goober";
    a.set(MS_ionization_type);
    a.version = "4.20";
    testObject(a);
}

void testTraData

(

)

Definition at line 166 of file IOTest.cpp.

References diff(), pwiz::identdata::examples::initializeTiny(), os_, pwiz::identdata::IO::read(), unit_assert, and write().

{
    if (os_) *os_ << "testTraData():\n";

    TraData a;
    examples::initializeTiny(a);

    // write 'a' out to a stream

    ostringstream oss;
    XMLWriter writer(oss);
    IO::write(writer, a);
    if (os_) *os_ << oss.str() << endl;

    // read 'b' in from stream

    TraData b;
    istringstream iss(oss.str());
    IO::read(iss, b);

    // compare 'a' and 'b'

    Diff<TraData, DiffConfig> diff(a,b);
    if (diff && os_) *os_ << "diff:\n" << diff << endl;
    unit_assert(!diff);
}

void test

(

)

Definition at line 194 of file IOTest.cpp.

References testCV(), testCVParam(), testTraData(), and testUserParam().

{
    testCV();
    testUserParam();
    testCVParam();
    //testNamedParamContainer<Contact>();
    //testNamedParamContainer<Publication>();
    /*testInstrument();
    testConfiguration();
    testPrecursor();
    testProduct();*/
    testTraData();
}

int main	(	int	argc,
		char *	argv[]
	)

Definition at line 209 of file IOTest.cpp.

References e(), os_, test(), TEST_EPILOG, TEST_FAILED, and TEST_PROLOG_EX.

{
    TEST_PROLOG_EX(argc, argv, "_TraData")

    try
    {
        if (argc>1 && !strcmp(argv[1],"-v")) os_ = &cout;
        test();
    }
    catch (exception& e)
    {
        TEST_FAILED(e.what())
    }
    catch (...)
    {
        TEST_FAILED("Caught unknown exception.")
    }

    TEST_EPILOG
}

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Variable Documentation

ostream* os_ = 0

Definition at line 36 of file IOTest.cpp.