pwiz::identdata::IO Namespace Reference

Functions
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const CV &cv)
PWIZ_API_DECL void	read (std::istream &is, CV &cv)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const UserParam &userParam)
PWIZ_API_DECL void	read (std::istream &is, UserParam &userParam)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const CVParam &cv)
PWIZ_API_DECL void	read (std::istream &is, CVParam &cv)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Identifiable &it)
PWIZ_API_DECL void	read (std::istream &is, Identifiable &it)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const IdentifiableParamContainer &it)
PWIZ_API_DECL void	read (std::istream &is, IdentifiableParamContainer &it)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const ContactRole &contactRole)
PWIZ_API_DECL void	read (std::istream &writer, ContactRole &contactRole)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Provider &provider)
PWIZ_API_DECL void	read (std::istream &writer, Provider &provider)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const SpectrumIdentification &si)
PWIZ_API_DECL void	read (std::istream &writer, SpectrumIdentification &si)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const IonType &ionType)
PWIZ_API_DECL void	read (std::istream &writer, IonType &ionType)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Measure &measure)
PWIZ_API_DECL void	read (std::istream &writer, Measure &measure)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Sample &sample)
PWIZ_API_DECL void	read (std::istream &writer, Sample &sample)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Person &cp)
PWIZ_API_DECL void	read (std::istream &writer, Person &cp)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Organization &cp)
PWIZ_API_DECL void	read (std::istream &writer, Organization &cp)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const SearchModification &sm)
PWIZ_API_DECL void	read (std::istream &is, SearchModification &sm)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Filter &filter)
PWIZ_API_DECL void	read (std::istream &is, Filter &filter)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const TranslationTable &tt)
PWIZ_API_DECL void	read (std::istream &is, TranslationTable &tt)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const DatabaseTranslation &dt)
PWIZ_API_DECL void	read (std::istream &is, DatabaseTranslation &dt)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const SpectrumIdentificationProtocol &sip)
PWIZ_API_DECL void	read (std::istream &is, SpectrumIdentificationProtocol &sip)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const ProteinDetectionProtocol &pdp)
PWIZ_API_DECL void	read (std::istream &is, ProteinDetectionProtocol &pdp)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const ProteinDetection &pd)
PWIZ_API_DECL void	read (std::istream &is, ProteinDetection &pd)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const AnalysisCollection &ac)
PWIZ_API_DECL void	read (std::istream &is, AnalysisCollection &ac)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Enzyme &ez)
PWIZ_API_DECL void	read (std::istream &is, Enzyme &ez)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Enzymes &ez)
PWIZ_API_DECL void	read (std::istream &is, Enzymes &ez)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Residue &r)
PWIZ_API_DECL void	read (std::istream &is, Residue &r)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const AmbiguousResidue &ar)
PWIZ_API_DECL void	read (std::istream &is, AmbiguousResidue &ar)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const MassTable &mt)
PWIZ_API_DECL void	read (std::istream &is, MassTable &mt)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const AnalysisProtocolCollection &apc)
PWIZ_API_DECL void	read (std::istream &is, AnalysisProtocolCollection &apc)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const SpectraData &sd)
PWIZ_API_DECL void	read (std::istream &is, SpectraData &sd)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const SourceFile &sf)
PWIZ_API_DECL void	read (std::istream &is, SourceFile &sf)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const SearchDatabase &sd)
PWIZ_API_DECL void	read (std::istream &is, SearchDatabase &sd)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Inputs &inputs)
PWIZ_API_DECL void	read (std::istream &is, Inputs &inputs)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const FragmentArray &fa)
PWIZ_API_DECL void	read (std::istream &is, FragmentArray &fa)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const SpectrumIdentificationItem &sir)
PWIZ_API_DECL void	read (std::istream &is, SpectrumIdentificationItem &sir)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const PeptideHypothesis &ph)
PWIZ_API_DECL void	read (std::istream &is, PeptideHypothesis &ph)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const ProteinDetectionHypothesis &pdh)
PWIZ_API_DECL void	read (std::istream &is, ProteinDetectionHypothesis &pdh)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const ProteinAmbiguityGroup &pag)
PWIZ_API_DECL void	read (std::istream &is, ProteinAmbiguityGroup &pag)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const SpectrumIdentificationList &sil, const pwiz::util::IterationListenerRegistry *iterationListenerRegistry=0)
PWIZ_API_DECL void	read (std::istream &is, SpectrumIdentificationList &sil, const pwiz::util::IterationListenerRegistry *iterationListenerRegistry=0)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const SpectrumIdentificationResult &sir)
PWIZ_API_DECL void	read (std::istream &is, SpectrumIdentificationResult &sir)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const ProteinDetectionList &pdl)
PWIZ_API_DECL void	read (std::istream &is, ProteinDetectionList &pdl)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const AnalysisData &pdl, const pwiz::util::IterationListenerRegistry *iterationListenerRegistry=0)
PWIZ_API_DECL void	read (std::istream &is, AnalysisData &pdl, const pwiz::util::IterationListenerRegistry *iterationListenerRegistry=0)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const BibliographicReference &bibliographicReference)
PWIZ_API_DECL void	read (std::istream &is, BibliographicReference &bibliographicReference)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const DataCollection &dataCollection, const pwiz::util::IterationListenerRegistry *iterationListenerRegistry=0)
PWIZ_API_DECL void	read (std::istream &is, DataCollection &dataCollection, const pwiz::util::IterationListenerRegistry *iterationListenerRegistry=0, AnalysisDataFlag analysisDataFlag=ReadAnalysisData)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const AnalysisSoftware &analysisSoftware)
PWIZ_API_DECL void	read (std::istream &is, AnalysisSoftware &analysisSoftware)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const DBSequence &dbSequence)
PWIZ_API_DECL void	read (std::istream &is, DBSequence &dbSequence)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Peptide &peptide)
PWIZ_API_DECL void	read (std::istream &is, Peptide &peptide)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const PeptideEvidence &pe)
PWIZ_API_DECL void	read (std::istream &is, PeptideEvidence &pe)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Modification &mod)
PWIZ_API_DECL void	read (std::istream &is, Modification &mod)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const SubstitutionModification &sm)
PWIZ_API_DECL void	read (std::istream &is, SubstitutionModification &sm)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const SequenceCollection &sc, const pwiz::util::IterationListenerRegistry *iterationListenerRegistry=0)
PWIZ_API_DECL void	read (std::istream &is, SequenceCollection &sc, const pwiz::util::IterationListenerRegistry *iterationListenerRegistry=0)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const AnalysisSampleCollection &asc)
PWIZ_API_DECL void	read (std::istream &is, AnalysisSampleCollection &asc)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const IdentData &identdata, const pwiz::util::IterationListenerRegistry *iterationListenerRegistry=0)
PWIZ_API_DECL void	read (std::istream &is, IdentData &identdata, const pwiz::util::IterationListenerRegistry *iterationListenerRegistry=0, SequenceCollectionFlag sequenceCollectionFlag=ReadSequenceCollection, AnalysisDataFlag analysisDataFlag=ReadAnalysisData)

---

Function Documentation

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const CV &	cv
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		CV &	cv
	)

Referenced by pwiz::msdata::Reader_Agilent::read(), pwiz::msdata::Reader_Bruker::read(), pwiz::msdata::Reader_Thermo::read(), pwiz::msdata::Reader_Waters::read(), pwiz::msdata::Reader_ABI_T2D::read(), Reader1::read(), Reader2::read(), TestReader::read(), testBinaryDataArray(), testBinaryDataArrayExternalMetadata(), testChromatogram(), testIdentData(), testMSData(), testObject(), testObject_ChromatogramList(), testObject_SpectrumList(), testObjectWithMSData(), testRun(), testSpectrum(), and testTraData().

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const UserParam &	userParam
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		UserParam &	userParam
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const CVParam &	cv
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		CVParam &	cv
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Identifiable &	it
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		Identifiable &	it
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const IdentifiableParamContainer &	it
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		IdentifiableParamContainer &	it
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const ContactRole &	contactRole
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	writer,
		ContactRole &	contactRole
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Provider &	provider
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	writer,
		Provider &	provider
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const SpectrumIdentification &	si
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	writer,
		SpectrumIdentification &	si
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const IonType &	ionType
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	writer,
		IonType &	ionType
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Measure &	measure
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	writer,
		Measure &	measure
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Sample &	sample
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	writer,
		Sample &	sample
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Person &	cp
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	writer,
		Person &	cp
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Organization &	cp
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	writer,
		Organization &	cp
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const SearchModification &	sm
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		SearchModification &	sm
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Filter &	filter
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		Filter &	filter
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const TranslationTable &	tt
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		TranslationTable &	tt
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const DatabaseTranslation &	dt
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		DatabaseTranslation &	dt
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const SpectrumIdentificationProtocol &	sip
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		SpectrumIdentificationProtocol &	sip
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const ProteinDetectionProtocol &	pdp
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		ProteinDetectionProtocol &	pdp
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const ProteinDetection &	pd
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		ProteinDetection &	pd
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const AnalysisCollection &	ac
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		AnalysisCollection &	ac
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Enzyme &	ez
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		Enzyme &	ez
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Enzymes &	ez
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		Enzymes &	ez
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Residue &	r
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		Residue &	r
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const AmbiguousResidue &	ar
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		AmbiguousResidue &	ar
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const MassTable &	mt
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		MassTable &	mt
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const AnalysisProtocolCollection &	apc
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		AnalysisProtocolCollection &	apc
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const SpectraData &	sd
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		SpectraData &	sd
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const SourceFile &	sf
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		SourceFile &	sf
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const SearchDatabase &	sd
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		SearchDatabase &	sd
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Inputs &	inputs
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		Inputs &	inputs
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const FragmentArray &	fa
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		FragmentArray &	fa
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const SpectrumIdentificationItem &	sir
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		SpectrumIdentificationItem &	sir
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const PeptideHypothesis &	ph
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		PeptideHypothesis &	ph
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const ProteinDetectionHypothesis &	pdh
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		ProteinDetectionHypothesis &	pdh
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const ProteinAmbiguityGroup &	pag
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		ProteinAmbiguityGroup &	pag
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const SpectrumIdentificationList &	sil,
		const pwiz::util::IterationListenerRegistry *	iterationListenerRegistry = 0
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		SpectrumIdentificationList &	sil,
		const pwiz::util::IterationListenerRegistry *	iterationListenerRegistry = 0
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const SpectrumIdentificationResult &	sir
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		SpectrumIdentificationResult &	sir
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const ProteinDetectionList &	pdl
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		ProteinDetectionList &	pdl
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const AnalysisData &	pdl,
		const pwiz::util::IterationListenerRegistry *	iterationListenerRegistry = 0
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		AnalysisData &	pdl,
		const pwiz::util::IterationListenerRegistry *	iterationListenerRegistry = 0
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const BibliographicReference &	bibliographicReference
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		BibliographicReference &	bibliographicReference
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const DataCollection &	dataCollection,
		const pwiz::util::IterationListenerRegistry *	iterationListenerRegistry = 0
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		DataCollection &	dataCollection,
		const pwiz::util::IterationListenerRegistry *	iterationListenerRegistry = 0,
		AnalysisDataFlag	analysisDataFlag = ReadAnalysisData
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const AnalysisSoftware &	analysisSoftware
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		AnalysisSoftware &	analysisSoftware
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const DBSequence &	dbSequence
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		DBSequence &	dbSequence
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Peptide &	peptide
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		Peptide &	peptide
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const PeptideEvidence &	pe
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		PeptideEvidence &	pe
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Modification &	mod
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		Modification &	mod
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const SubstitutionModification &	sm
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		SubstitutionModification &	sm
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const SequenceCollection &	sc,
		const pwiz::util::IterationListenerRegistry *	iterationListenerRegistry = 0
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		SequenceCollection &	sc,
		const pwiz::util::IterationListenerRegistry *	iterationListenerRegistry = 0
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const AnalysisSampleCollection &	asc
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		AnalysisSampleCollection &	asc
	)

PWIZ_API_DECL void pwiz::identdata::IO::write	(	minimxml::XMLWriter &	writer,
		const IdentData &	identdata,
		const pwiz::util::IterationListenerRegistry *	iterationListenerRegistry = 0
	)

PWIZ_API_DECL void pwiz::identdata::IO::read	(	std::istream &	is,
		IdentData &	identdata,
		const pwiz::util::IterationListenerRegistry *	iterationListenerRegistry = 0,
		SequenceCollectionFlag	sequenceCollectionFlag = ReadSequenceCollection,
		AnalysisDataFlag	analysisDataFlag = ReadAnalysisData
	)