Parent class of all Identifiable objects that have ParamGroups. More...
#include <IdentData.hpp>
Public Member Functions | |
| IdentifiableParamContainer (const std::string &id_="", const std::string &name_="") | |
| virtual | ~IdentifiableParamContainer () |
| virtual bool | empty () const |
| returns true iff the element contains no params or param groups | |
 Public Member Functions inherited from pwiz::data::ParamContainer | |
| CVParam | cvParam (CVID cvid) const |
| finds cvid in the container: | |
| CVParam | cvParamChild (CVID cvid) const |
| finds child of cvid in the container: | |
| std::vector< CVParam > | cvParamChildren (CVID cvid) const |
| finds all children of cvid in the container: | |
| bool | hasCVParam (CVID cvid) const |
| returns true iff cvParams contains exact cvid (recursive) | |
| bool | hasCVParamChild (CVID cvid) const |
| returns true iff cvParams contains a child (is_a) of cvid (recursive) | |
| UserParam | userParam (const std::string &) const |
| finds UserParam with specified name | |
| void | set (CVID cvid, const std::string &value="", CVID units=CVID_Unknown) |
| set/add a CVParam (not recursive) | |
| void | set (CVID cvid, double value, CVID units=CVID_Unknown) |
| set/add a CVParam (not recursive) | |
| void | set (CVID cvid, int value, CVID units=CVID_Unknown) |
| set/add a CVParam (not recursive) | |
| template<typename value_type > | |
| void | set (CVID cvid, value_type value, CVID units=CVID_Unknown) |
| set/add a CVParam (not recursive) | |
| void | clear () |
| clears the collections | |
| bool | operator== (const ParamContainer &that) const |
| returns true iff this and that have the exact same cvParams and userParams | |
| bool | operator!= (const ParamContainer &that) const |
| returns !(this==that) | |
| template<> | |
| void | set (CVID cvid, bool value, CVID units) |
| special case for bool (outside the class for gcc 3.4, and inline for msvc) | |
Public Attributes | |
| std::string | id |
| std::string | name |
| Public Attributes inherited from pwiz::data::ParamContainer | |
| std::vector< ParamGroupPtr > | paramGroupPtrs |
| a collection of references to ParamGroups | |
| std::vector< CVParam > | cvParams |
| a collection of controlled vocabulary terms | |
| std::vector< UserParam > | userParams |
| a collection of uncontrolled user terms | |
Detailed Description
Parent class of all Identifiable objects that have ParamGroups.
Represents bibliographic references.
Definition at line 79 of file IdentData.hpp.
Constructor & Destructor Documentation
| pwiz::identdata::IdentifiableParamContainer::IdentifiableParamContainer | ( | const std::string & | id_ = "", |
| const std::string & | name_ = "" |
||
| ) |
|
inlinevirtual |
Definition at line 83 of file IdentData.hpp.
Member Function Documentation
|
virtual |
returns true iff the element contains no params or param groups
Reimplemented from pwiz::data::ParamContainer.
Reimplemented in pwiz::identdata::SourceFile, pwiz::identdata::ProteinDetectionList, pwiz::identdata::ProteinAmbiguityGroup, pwiz::identdata::ProteinDetectionHypothesis, pwiz::identdata::SpectrumIdentificationResult, pwiz::identdata::SpectrumIdentificationItem, pwiz::identdata::PeptideEvidence, pwiz::identdata::Measure, pwiz::identdata::Peptide, pwiz::identdata::DBSequence, pwiz::identdata::SearchDatabase, pwiz::identdata::Sample, pwiz::identdata::Person, pwiz::identdata::Organization, and pwiz::identdata::Contact.
Member Data Documentation
| std::string pwiz::identdata::IdentifiableParamContainer::id |
Definition at line 85 of file IdentData.hpp.
Referenced by pwiz::identdata::TextWriter::operator()(), testContact(), testDBSequence(), testIdentifiableParamContainer(), testMeasure(), testPeptide(), testPeptideEvidence(), testProteinAmbiguityGroup(), testProteinDetectionHypothesis(), testProteinDetectionList(), testSearchDatabase(), testSourceFile(), testSpectrumIdentificationItem(), and testSpectrumIdentificationResult().
| std::string pwiz::identdata::IdentifiableParamContainer::name |
Definition at line 86 of file IdentData.hpp.
Referenced by pwiz::identdata::TextWriter::operator()(), testContact(), testDBSequence(), testIdentifiableParamContainer(), and testPeptide().
The documentation for this struct was generated from the following file:
- /Users/parag/_Research/pwiz/svn/trunk/pwiz/pwiz/data/identdata/IdentData.hpp
