Pep2MzIdentTest.cpp File Reference

#include "Pep2MzIdent.hpp"
#include "Serializer_mzid.hpp"
#include <iostream>
#include <string>

Go to the source code of this file.

Functions
void	test ()
int	main (int argc, char **argv)

Variables
ostream *	os_ = NULL
const char *	samplePepXML = "</msms_pipeline_analysis>\n"

---

Function Documentation

void test

(

)

Definition at line 89 of file Pep2MzIdentTest.cpp.

References os_, pwiz::data::pepxml::MSMSPipelineAnalysis::read(), samplePepXML, pwiz::identdata::Pep2MzIdent::translate(), and pwiz::identdata::Serializer_mzIdentML::write().

{
    istringstream iss(samplePepXML);
    MSMSPipelineAnalysis mspa;
    mspa.read(iss);

    Pep2MzIdent translator(mspa);
    IdentDataPtr result(translator.translate());

    Serializer_mzIdentML serializer;
    ostringstream oss;
    serializer.write(oss, *result);

    if (os_)
        *os_ << oss.str() << endl;

}

int main	(	int	argc,
		char **	argv
	)

Definition at line 107 of file Pep2MzIdentTest.cpp.

References os_, and test().

{
    if (argc>1 && !strcmp(argv[1],"-v")) os_ = &cout;

    cout << "\ntesting Pep2MzIdent ... \n" << endl;
    test();
    return 0;
}

---

Variable Documentation

ostream* os_ = NULL

Definition at line 31 of file Pep2MzIdentTest.cpp.

const char* samplePepXML = "</msms_pipeline_analysis>\n"

Definition at line 33 of file Pep2MzIdentTest.cpp.