MinimumPepXML.hpp File Reference

#include "pwiz/utility/minimxml/XMLWriter.hpp"
#include "pwiz/data/misc/PeakData.hpp"
#include "boost/shared_ptr.hpp"
#include "boost/logic/tribool.hpp"
#include <iostream>
#include <stdexcept>

Go to the source code of this file.

Classes
struct	pwiz::data::pepxml::Specificity
struct	pwiz::data::pepxml::SampleEnzyme
struct	pwiz::data::pepxml::SearchDatabase
struct	pwiz::data::pepxml::Q3RatioResult
struct	pwiz::data::pepxml::RocDataPoint
struct	pwiz::data::pepxml::ErrorPoint
struct	pwiz::data::pepxml::DistributionPoint
struct	pwiz::data::pepxml::MixtureModel
struct	pwiz::data::pepxml::PeptideProphetSummary
struct	pwiz::data::pepxml::PeptideProphetResult
struct	pwiz::data::pepxml::AnalysisResult
struct	pwiz::data::pepxml::AlternativeProtein
struct	pwiz::data::pepxml::ModAminoAcidMass
struct	pwiz::data::pepxml::ModificationInfo
struct	pwiz::data::pepxml::Parameter
struct	pwiz::data::pepxml::SearchScore
struct	pwiz::data::pepxml::SearchHit
struct	pwiz::data::pepxml::SearchResult
struct	pwiz::data::pepxml::EnzymaticSearchConstraint
struct	pwiz::data::pepxml::AminoAcidModification
struct	pwiz::data::pepxml::SearchSummary
	Database search settings. More...
struct	pwiz::data::pepxml::AnalysisTimestamp
	Reference for analysis applied to current run (time corresponds with analysis_summary/, id corresponds with analysis_result/) More...
struct	pwiz::data::pepxml::SpectrumQuery
struct	pwiz::data::pepxml::MSMSRunSummary
struct	pwiz::data::pepxml::AnalysisSummary
struct	pwiz::data::pepxml::DataFilter
struct	pwiz::data::pepxml::DatasetDerivation
	Source and filtering criteria used to generate dataset. More...
struct	pwiz::data::pepxml::MSMSPipelineAnalysis
struct	pwiz::data::pepxml::Match
struct	pwiz::data::pepxml::MatchData

Namespaces
namespace	pwiz
	AMTContainer.hpp.
namespace	pwiz::data
namespace	pwiz::data::pepxml

Typedefs
typedef boost::shared_ptr < Parameter >	pwiz::data::pepxml::ParameterPtr
typedef boost::shared_ptr < SearchScore >	pwiz::data::pepxml::SearchScorePtr
typedef boost::shared_ptr < SearchHit >	pwiz::data::pepxml::SearchHitPtr
typedef boost::shared_ptr < SearchResult >	pwiz::data::pepxml::SearchResultPtr
typedef boost::shared_ptr < SearchSummary >	pwiz::data::pepxml::SearchSummaryPtr
typedef boost::shared_ptr < SpectrumQuery >	pwiz::data::pepxml::SpectrumQueryPtr
typedef boost::shared_ptr < AnalysisSummary >	pwiz::data::pepxml::AnalysisSummaryPtr
typedef boost::shared_ptr < DataFilter >	pwiz::data::pepxml::DataFilterPtr
typedef boost::shared_ptr < DatasetDerivation >	pwiz::data::pepxml::DatasetDerivationPtr
typedef boost::shared_ptr< Match >	pwiz::data::pepxml::MatchPtr

Functions
void	pwiz::data::pepxml::setLogStream (std::ostream &os)
PWIZ_API_DECL bool	pwiz::data::pepxml::operator== (const SearchHitPtr left, const SearchHitPtr right)
PWIZ_API_DECL bool	pwiz::data::pepxml::operator== (SearchResultPtr left, SearchResultPtr right)
PWIZ_API_DECL bool	pwiz::data::pepxml::operator== (const SearchSummaryPtr left, const SearchSummaryPtr right)
PWIZ_API_DECL bool	pwiz::data::pepxml::operator== (const SpectrumQueryPtr left, const SpectrumQueryPtr right)
PWIZ_API_DECL bool	pwiz::data::pepxml::operator== (const MatchPtr left, const MatchPtr right)