ProteoWizard: pwiz::data::pepxml::SpectrumQuery Struct Reference

ProteoWizard

#include <MinimumPepXML.hpp>

List of all members.

Public Member Functions
	SpectrumQuery ()
void	write (XMLWriter &writer) const
void	read (std::istream &is)
bool	operator== (const SpectrumQuery &that) const
bool	operator!= (const SpectrumQuery &that) const

Public Attributes
std::string	spectrum
int	startScan
	first scan number integrated into MS/MS spectrum
int	endScan
	last scan number integrated into MS/MS spectrum
double	precursorNeutralMass
int	assumedCharge
	Precursor ion charge used for search.
int	index
	Search constraint applied specifically to this query.
double	retentionTimeSec
	Unique identifier.
std::vector< SearchResultPtr >	searchResult

Detailed Description

Definition at line 487 of file MinimumPepXML.hpp.

Constructor & Destructor Documentation

pwiz::data::pepxml::SpectrumQuery::SpectrumQuery ( )

inline

Definition at line 489 of file MinimumPepXML.hpp.

: startScan(0), endScan(0), precursorNeutralMass(0), assumedCharge(0), index(0), retentionTimeSec(0) {}

Member Function Documentation

void pwiz::data::pepxml::SpectrumQuery::write ( XMLWriter & writer ) const

Referenced by test(), testPeptideID_dataFetcherConstructor(), and testSpectrumQuery().

void pwiz::data::pepxml::SpectrumQuery::read ( std::istream & is )

Referenced by testSpectrumQuery().

bool pwiz::data::pepxml::SpectrumQuery::operator== ( const SpectrumQuery & that ) const

bool pwiz::data::pepxml::SpectrumQuery::operator!= ( const SpectrumQuery & that ) const

Member Data Documentation

std::string pwiz::data::pepxml::SpectrumQuery::spectrum

Definition at line 491 of file MinimumPepXML.hpp.

Referenced by makeSpectrumQuery().

int pwiz::data::pepxml::SpectrumQuery::startScan

first scan number integrated into MS/MS spectrum

Definition at line 494 of file MinimumPepXML.hpp.

Referenced by makeSpectrumQuery().

int pwiz::data::pepxml::SpectrumQuery::endScan

last scan number integrated into MS/MS spectrum

Definition at line 497 of file MinimumPepXML.hpp.

Referenced by makeSpectrumQuery().

double pwiz::data::pepxml::SpectrumQuery::precursorNeutralMass

Definition at line 499 of file MinimumPepXML.hpp.

Referenced by makeSpectrumQuery(), and test().

int pwiz::data::pepxml::SpectrumQuery::assumedCharge

Precursor ion charge used for search.

Definition at line 502 of file MinimumPepXML.hpp.

Referenced by makeSpectrumQuery(), and test().

int pwiz::data::pepxml::SpectrumQuery::index

Search constraint applied specifically to this query.

Definition at line 505 of file MinimumPepXML.hpp.

Referenced by makeSpectrumQuery().

double pwiz::data::pepxml::SpectrumQuery::retentionTimeSec

Unique identifier.

Definition at line 508 of file MinimumPepXML.hpp.

Referenced by makeSpectrumQuery(), test(), testAdjustRT(), and testMerge().

std::vector<SearchResultPtr> pwiz::data::pepxml::SpectrumQuery::searchResult

Definition at line 510 of file MinimumPepXML.hpp.

Referenced by makeSpectrumQuery().

The documentation for this struct was generated from the following file:

/Users/parag/_Research/pwiz/svn/trunk/pwiz/pwiz/data/misc/MinimumPepXML.hpp