#include <AMTDatabase.hpp>
Inheritance diagram for pwiz::eharmony::IslandizedDatabase:
Classes | |
| struct | Gaussian |
| struct | Island |
Public Member Functions | |
| IslandizedDatabase (boost::shared_ptr< AMTContainer > amtContainer) | |
| virtual std::vector < SpectrumQuery > | query (DfcPtr dfc, const WarpFunctionEnum &wfe, NormalDistributionSearch &nds, MSMSPipelineAnalysis &mspa_in, string outputDir="./amtdb_query") |
 Public Member Functions inherited from pwiz::eharmony::AMTDatabase | |
| AMTDatabase (const AMTContainer &amtContainer) | |
| virtual std::vector < SpectrumQuery > | query (DfcPtr dfc, const WarpFunctionEnum &wfe, NormalDistributionSearch &nds, MSMSPipelineAnalysis &mspa_in, string outputDir="./amtdb_query", const int &roc=0, const double &threshold=0.75) |
Public Attributes | |
| vector< Island > | islands |
| vector< string > | uniquePeptides |
| Public Attributes inherited from pwiz::eharmony::AMTDatabase | |
| PidfPtr | _peptides |
Detailed Description
Definition at line 48 of file AMTDatabase.hpp.
Constructor & Destructor Documentation
| pwiz::eharmony::IslandizedDatabase::IslandizedDatabase | ( | boost::shared_ptr< AMTContainer > | amtContainer | ) |
Member Function Documentation
|
virtual |
Member Data Documentation
| vector<Island> pwiz::eharmony::IslandizedDatabase::islands |
Definition at line 91 of file AMTDatabase.hpp.
| vector<string> pwiz::eharmony::IslandizedDatabase::uniquePeptides |
Definition at line 92 of file AMTDatabase.hpp.
The documentation for this struct was generated from the following file:
- /Users/parag/_Research/pwiz/svn/trunk/pwiz/pwiz/analysis/eharmony/AMTDatabase.hpp
