pwiz::eharmony::Feature2PeptideMatcher Class Reference

#include <Feature2PeptideMatcher.hpp>

List of all members.

Public Member Functions
	Feature2PeptideMatcher ()
	Feature2PeptideMatcher (FdfPtr a, PidfPtr b, const NormalDistributionSearch &nds, const int &rocStats=0, const double &threshold=0.75)
std::vector< MatchPtr >	getMatches () const
std::vector< MatchPtr >	getMismatches () const
std::vector< MatchPtr >	getTruePositives () const
std::vector< MatchPtr >	getFalsePositives () const
std::vector< MatchPtr >	getTrueNegatives () const
std::vector< MatchPtr >	getFalseNegatives () const
std::vector< MatchPtr >	getUnknownPositives () const
std::vector< MatchPtr >	getUnknownNegatives () const
bool	operator== (const Feature2PeptideMatcher &that)
bool	operator!= (const Feature2PeptideMatcher &that)

Public Attributes
std::vector< MatchPtr >	_matches
std::vector< MatchPtr >	_mismatches
std::vector< MatchPtr >	_truePositives
std::vector< MatchPtr >	_falsePositives
std::vector< MatchPtr >	_trueNegatives
std::vector< MatchPtr >	_falseNegatives
std::vector< MatchPtr >	_unknownPositives
std::vector< MatchPtr >	_unknownNegatives

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Detailed Description

Definition at line 39 of file Feature2PeptideMatcher.hpp.

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Constructor & Destructor Documentation

pwiz::eharmony::Feature2PeptideMatcher::Feature2PeptideMatcher ( )

inline

Definition at line 44 of file Feature2PeptideMatcher.hpp.

{}

pwiz::eharmony::Feature2PeptideMatcher::Feature2PeptideMatcher	(	FdfPtr	a,
		PidfPtr	b,
		const NormalDistributionSearch &	nds,
		const int &	rocStats = 0,
		const double &	threshold = 0.75
	)

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Member Function Documentation

std::vector<MatchPtr> pwiz::eharmony::Feature2PeptideMatcher::getMatches ( ) const

inline

Definition at line 48 of file Feature2PeptideMatcher.hpp.

References _matches.

{ return _matches;}

std::vector<MatchPtr> pwiz::eharmony::Feature2PeptideMatcher::getMismatches ( ) const

inline

Definition at line 49 of file Feature2PeptideMatcher.hpp.

References _mismatches.

{ return _mismatches;}

std::vector<MatchPtr> pwiz::eharmony::Feature2PeptideMatcher::getTruePositives ( ) const

inline

Definition at line 50 of file Feature2PeptideMatcher.hpp.

References _truePositives.

{ return _truePositives;}

std::vector<MatchPtr> pwiz::eharmony::Feature2PeptideMatcher::getFalsePositives ( ) const

inline

Definition at line 51 of file Feature2PeptideMatcher.hpp.

References _falsePositives.

{ return _falsePositives;}

std::vector<MatchPtr> pwiz::eharmony::Feature2PeptideMatcher::getTrueNegatives ( ) const

inline

Definition at line 52 of file Feature2PeptideMatcher.hpp.

References _trueNegatives.

{ return _trueNegatives;}

std::vector<MatchPtr> pwiz::eharmony::Feature2PeptideMatcher::getFalseNegatives ( ) const

inline

Definition at line 53 of file Feature2PeptideMatcher.hpp.

References _falseNegatives.

{ return _falseNegatives;}

std::vector<MatchPtr> pwiz::eharmony::Feature2PeptideMatcher::getUnknownPositives ( ) const

inline

Definition at line 54 of file Feature2PeptideMatcher.hpp.

References _unknownPositives.

{ return _unknownPositives;}

std::vector<MatchPtr> pwiz::eharmony::Feature2PeptideMatcher::getUnknownNegatives ( ) const

inline

Definition at line 55 of file Feature2PeptideMatcher.hpp.

References _unknownNegatives.

{ return _unknownNegatives;}

bool pwiz::eharmony::Feature2PeptideMatcher::operator==

(

const Feature2PeptideMatcher &

that

)

bool pwiz::eharmony::Feature2PeptideMatcher::operator!=

(

const Feature2PeptideMatcher &

that

)

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Member Data Documentation

std::vector<MatchPtr> pwiz::eharmony::Feature2PeptideMatcher::_matches

Definition at line 61 of file Feature2PeptideMatcher.hpp.

Referenced by getMatches().

std::vector<MatchPtr> pwiz::eharmony::Feature2PeptideMatcher::_mismatches

Definition at line 62 of file Feature2PeptideMatcher.hpp.

Referenced by getMismatches().

std::vector<MatchPtr> pwiz::eharmony::Feature2PeptideMatcher::_truePositives

Definition at line 65 of file Feature2PeptideMatcher.hpp.

Referenced by getTruePositives().

std::vector<MatchPtr> pwiz::eharmony::Feature2PeptideMatcher::_falsePositives

Definition at line 66 of file Feature2PeptideMatcher.hpp.

Referenced by getFalsePositives().

std::vector<MatchPtr> pwiz::eharmony::Feature2PeptideMatcher::_trueNegatives

Definition at line 67 of file Feature2PeptideMatcher.hpp.

Referenced by getTrueNegatives().

std::vector<MatchPtr> pwiz::eharmony::Feature2PeptideMatcher::_falseNegatives

Definition at line 68 of file Feature2PeptideMatcher.hpp.

Referenced by getFalseNegatives().

std::vector<MatchPtr> pwiz::eharmony::Feature2PeptideMatcher::_unknownPositives

Definition at line 69 of file Feature2PeptideMatcher.hpp.

Referenced by getUnknownPositives().

std::vector<MatchPtr> pwiz::eharmony::Feature2PeptideMatcher::_unknownNegatives

Definition at line 70 of file Feature2PeptideMatcher.hpp.

Referenced by getUnknownNegatives().

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The documentation for this class was generated from the following file:

• /Users/parag/_Research/pwiz/svn/trunk/pwiz/pwiz/analysis/eharmony/Feature2PeptideMatcher.hpp