SimpleAnalyzer Struct Reference

Inheritance diagram for SimpleAnalyzer:

List of all members.

Public Member Functions
	SimpleAnalyzer (size_t _index)
virtual void	open (const DataInfo &dataInfo)
	start analysis of the data
virtual UpdateRequest	updateRequested (const DataInfo &dataInfo, const SpectrumIdentity &entry) const
virtual void	update (const DataInfo &dataInfo, const Spectrum &spectrum)
virtual void	close (const DataInfo &dataInfo)
	end analysis of the data
Public Member Functions inherited from pwiz::analysis::MSDataAnalyzer
virtual	~MSDataAnalyzer ()
virtual UpdateRequest	updateRequested (const DataInfo &dataInfo, const SpectrumIdentity &spectrumIdentity) const
	ask analyzer if it wants an update
virtual void	update (const DataInfo &dataInfo, const Spectrum &spectrum)
	analyze a single spectrum

Public Attributes
size_t	index
bool	opened
int	updateCount
bool	closed

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Detailed Description

Definition at line 37 of file MSDataAnalyzerTest.cpp.

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Constructor & Destructor Documentation

SimpleAnalyzer::SimpleAnalyzer ( size_t  _index )

inline

Definition at line 44 of file MSDataAnalyzerTest.cpp.

: index(_index), opened(false), updateCount(0), closed(false) {}

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Member Function Documentation

virtual void SimpleAnalyzer::open ( const DataInfo &  dataInfo )

inlinevirtual

start analysis of the data

Reimplemented from pwiz::analysis::MSDataAnalyzer.

Definition at line 46 of file MSDataAnalyzerTest.cpp.

    {
        // initialize everything, since Analyzers may be reused
        opened = false;
        updateCount = 0; 
        closed=false;

        // do something   
        opened = true; 
    }

virtual UpdateRequest SimpleAnalyzer::updateRequested ( const DataInfo &  dataInfo, const SpectrumIdentity &  entry  ) const

inlinevirtual

Definition at line 57 of file MSDataAnalyzerTest.cpp.

References UpdateRequest_NoBinary, and UpdateRequest_None.

    {
        // only request this->index
        return entry.index == index ? UpdateRequest_NoBinary : UpdateRequest_None;
    }

virtual void SimpleAnalyzer::update ( const DataInfo &  dataInfo, const Spectrum &  spectrum  )

inlinevirtual

Definition at line 64 of file MSDataAnalyzerTest.cpp.

References os_.

    {
        if (os_) *os_ << "[" << index << "]" << " update: " << spectrum.index << endl;
        updateCount++;
    }

virtual void SimpleAnalyzer::close ( const DataInfo &  dataInfo )

inlinevirtual

end analysis of the data

Reimplemented from pwiz::analysis::MSDataAnalyzer.

Definition at line 71 of file MSDataAnalyzerTest.cpp.

{closed = true;}

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Member Data Documentation

size_t SimpleAnalyzer::index

Definition at line 39 of file MSDataAnalyzerTest.cpp.

bool SimpleAnalyzer::opened

Definition at line 40 of file MSDataAnalyzerTest.cpp.

Referenced by test().

int SimpleAnalyzer::updateCount

Definition at line 41 of file MSDataAnalyzerTest.cpp.

Referenced by test().

bool SimpleAnalyzer::closed

Definition at line 42 of file MSDataAnalyzerTest.cpp.

Referenced by test().

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The documentation for this struct was generated from the following file:

• /Users/parag/_Research/pwiz/svn/trunk/pwiz/pwiz/analysis/passive/MSDataAnalyzerTest.cpp