Identifying information for a spectrum. More...
#include <MSData.hpp>
Public Member Functions | |
| SpectrumIdentity () | |
Public Attributes | |
| size_t | index |
| the zero-based, consecutive index of the spectrum in the SpectrumList. | |
| std::string | id |
| a unique identifier for this spectrum. It should be expected that external files may use this identifier together with the mzML filename or accession to reference a particular spectrum. | |
| std::string | spotID |
| the identifier for the spot from which this spectrum was derived, if a MALDI or similar run. | |
| boost::iostreams::stream_offset | sourceFilePosition |
| for file-based MSData implementations, this attribute may refer to the spectrum's position in the file | |
Detailed Description
Identifying information for a spectrum.
Definition at line 468 of file MSData.hpp.
Constructor & Destructor Documentation
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inline |
Definition at line 483 of file MSData.hpp.
Member Data Documentation
| size_t pwiz::msdata::SpectrumIdentity::index |
the zero-based, consecutive index of the spectrum in the SpectrumList.
Definition at line 471 of file MSData.hpp.
Referenced by EvenPredicate::accept(), EvenMS2Predicate::accept(), SelectedIndexPredicate::accept(), initializeTestData(), initializeTinyMGF(), initializeTinyMS1(), initializeTinyMS2(), pwiz::analysis::SpectrumList_Sorter::Predicate::less(), pwiz::msdata::TextWriter::operator()(), test(), testSpectrum(), testSpectrumListSimple(), verifyPrecursorInfo(), and verifyPrecursorMZ().
| std::string pwiz::msdata::SpectrumIdentity::id |
a unique identifier for this spectrum. It should be expected that external files may use this identifier together with the mzML filename or accession to reference a particular spectrum.
Definition at line 474 of file MSData.hpp.
Referenced by doSomething(), getScanNumber(), initializeTestData(), initializeTinyMGF(), initializeTinyMS1(), initializeTinyMS2(), DefaultArrayLengthSorter::less(), pwiz::msdata::TextWriter::operator()(), test(), testBasic(), testEvenMS2(), testIndexSet(), testMassAnalyzerFilter(), testMS2Activation(), testMSLevelSet(), testScanEventSet(), testScanNumberSet(), testScanTimeRange(), testSelectedIndices(), testSpectrum(), testSpectrumListSimple(), verifyPrecursorInfo(), and verifyPrecursorMZ().
| std::string pwiz::msdata::SpectrumIdentity::spotID |
the identifier for the spot from which this spectrum was derived, if a MALDI or similar run.
Definition at line 477 of file MSData.hpp.
Referenced by pwiz::msdata::TextWriter::operator()().
| boost::iostreams::stream_offset pwiz::msdata::SpectrumIdentity::sourceFilePosition |
for file-based MSData implementations, this attribute may refer to the spectrum's position in the file
Definition at line 480 of file MSData.hpp.
Referenced by testSpectrum().
The documentation for this struct was generated from the following file:
- /Users/parag/_Research/pwiz/svn/trunk/pwiz/pwiz/data/msdata/MSData.hpp
