| CTerminusIsSpecific() const | pwiz::proteome::DigestedPeptide | |
| CTerminusIsSpecific_ | pwiz::proteome::DigestedPeptide | private |
| CTerminusSuffix() const | pwiz::proteome::DigestedPeptide | |
| CTerminusSuffix_ | pwiz::proteome::DigestedPeptide | private |
| DigestedPeptide(const std::string &sequence) | pwiz::proteome::DigestedPeptide | |
| DigestedPeptide(const char *sequence) | pwiz::proteome::DigestedPeptide | |
| DigestedPeptide(std::string::const_iterator begin, std::string::const_iterator end, size_t offset, size_t missedCleavages, bool NTerminusIsSpecific, bool CTerminusIsSpecific, std::string NTerminusPrefix="", std::string CTerminusSuffix="") | pwiz::proteome::DigestedPeptide | |
| DigestedPeptide(const Peptide &peptide, size_t offset, size_t missedCleavages, bool NTerminusIsSpecific, bool CTerminusIsSpecific, std::string NTerminusPrefix="", std::string CTerminusSuffix="") | pwiz::proteome::DigestedPeptide | |
| DigestedPeptide(const DigestedPeptide &) | pwiz::proteome::DigestedPeptide | |
| formula(bool modified=false) const | pwiz::proteome::Peptide | |
| fragmentation(bool monoisotopic=true, bool modified=true) const | pwiz::proteome::Peptide | |
| missedCleavages() const | pwiz::proteome::DigestedPeptide | |
| missedCleavages_ | pwiz::proteome::DigestedPeptide | private |
| modifications() | pwiz::proteome::Peptide | |
| modifications() const | pwiz::proteome::Peptide | |
| molecularWeight(int charge=0, bool modified=true) const | pwiz::proteome::Peptide | |
| monoisotopicMass(int charge=0, bool modified=true) const | pwiz::proteome::Peptide | |
| NTerminusIsSpecific() const | pwiz::proteome::DigestedPeptide | |
| NTerminusIsSpecific_ | pwiz::proteome::DigestedPeptide | private |
| NTerminusPrefix() const | pwiz::proteome::DigestedPeptide | |
| NTerminusPrefix_ | pwiz::proteome::DigestedPeptide | private |
| offset() const | pwiz::proteome::DigestedPeptide | |
| offset_ | pwiz::proteome::DigestedPeptide | private |
| operator<(const Peptide &rhs) const | pwiz::proteome::Peptide | |
| operator=(const DigestedPeptide &) | pwiz::proteome::DigestedPeptide | |
| pwiz::proteome::Peptide::operator=(const Peptide &) | pwiz::proteome::Peptide | |
| operator==(const DigestedPeptide &rhs) const | pwiz::proteome::DigestedPeptide | |
| pwiz::proteome::Peptide::operator==(const Peptide &rhs) const | pwiz::proteome::Peptide | |
| Peptide(const std::string &sequence="", MODIFICATION_PARSING_ARGUMENTS) | pwiz::proteome::Peptide | |
| Peptide(const char *sequence, MODIFICATION_PARSING_ARGUMENTS) | pwiz::proteome::Peptide | |
| Peptide(std::string::const_iterator begin, std::string::const_iterator end, MODIFICATION_PARSING_ARGUMENTS) | pwiz::proteome::Peptide | |
| Peptide(const char *begin, const char *end, MODIFICATION_PARSING_ARGUMENTS) | pwiz::proteome::Peptide | |
| Peptide(const Peptide &) | pwiz::proteome::Peptide | |
| sequence() const | pwiz::proteome::Peptide | |
| specificTermini() const | pwiz::proteome::DigestedPeptide | |
| ~DigestedPeptide() | pwiz::proteome::DigestedPeptide | virtual |
| ~Peptide() | pwiz::proteome::Peptide | virtual |