| addSpectrumIndexPair(const std::string &name, const unsigned long index) const | pwiz::msdata::mz5::ReferenceRead_mz5 | |
| bbmapping_ | pwiz::msdata::mz5::ReferenceRead_mz5 | mutableprivate |
| cvParams_ | pwiz::msdata::mz5::ReferenceRead_mz5 | mutableprivate |
| cvrefs_ | pwiz::msdata::mz5::ReferenceRead_mz5 | mutableprivate |
| defaultChromatogramDataProcessingRefID_ | pwiz::msdata::mz5::ReferenceRead_mz5 | mutableprivate |
| defaultSpectrumDataProcessingRefID_ | pwiz::msdata::mz5::ReferenceRead_mz5 | mutableprivate |
| fill(std::vector< pwiz::msdata::CVParam > &cv, std::vector< pwiz::msdata::UserParam > &user, std::vector< pwiz::msdata::ParamGroupPtr > ¶m, const unsigned long &cvstart, const unsigned long &cvend, const unsigned long &usrstart, const unsigned long &usrend, const unsigned long &refstart, const unsigned long &refend) const | pwiz::msdata::mz5::ReferenceRead_mz5 | |
| fill(boost::shared_ptr< Connection_mz5 > &connection) | pwiz::msdata::mz5::ReferenceRead_mz5 | |
| getCVID(const unsigned long) const | pwiz::msdata::mz5::ReferenceRead_mz5 | |
| getDataProcessingPtr(const unsigned long) const | pwiz::msdata::mz5::ReferenceRead_mz5 | |
| getDefaultChromatogramDP(const size_t index) | pwiz::msdata::mz5::ReferenceRead_mz5 | |
| getDefaultSpectrumDP(const size_t index) | pwiz::msdata::mz5::ReferenceRead_mz5 | |
| getInstrumentPtr(const unsigned long) const | pwiz::msdata::mz5::ReferenceRead_mz5 | |
| getParamGroupPtr(const unsigned long) const | pwiz::msdata::mz5::ReferenceRead_mz5 | |
| getSamplePtr(const unsigned long) const | pwiz::msdata::mz5::ReferenceRead_mz5 | |
| getScanSettingPtr(const unsigned long) const | pwiz::msdata::mz5::ReferenceRead_mz5 | |
| getSoftwarePtr(const unsigned long) const | pwiz::msdata::mz5::ReferenceRead_mz5 | |
| getSourcefilePtr(const unsigned long) const | pwiz::msdata::mz5::ReferenceRead_mz5 | |
| getSpectrumId(const unsigned long) const | pwiz::msdata::mz5::ReferenceRead_mz5 | |
| msd_ | pwiz::msdata::mz5::ReferenceRead_mz5 | private |
| ReferenceRead_mz5(pwiz::msdata::MSData &msd) | pwiz::msdata::mz5::ReferenceRead_mz5 | |
| refParms_ | pwiz::msdata::mz5::ReferenceRead_mz5 | mutableprivate |
| setCVRefMZ5(CVRefMZ5 *, size_t) | pwiz::msdata::mz5::ReferenceRead_mz5 | |
| spectrumIndex_ | pwiz::msdata::mz5::ReferenceRead_mz5 | mutableprivate |
| usrParams_ | pwiz::msdata::mz5::ReferenceRead_mz5 | mutableprivate |